Methylomagnum ishizawai: MishRS11D_40980
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Entry
MishRS11D_40980 CDS
T07434
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
misz01011
]
MishRS11D_40980
Enzymes [BR:
misz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MishRS11D_40980
Peptidoglycan biosynthesis and degradation proteins [BR:
misz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MishRS11D_40980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BBL77000
LinkDB
All DBs
Position
complement(4571153..4572310)
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AA seq
385 aa
AA seq
DB search
MIGVSTRGIRFDRDRLRALRIISPAWVFQDGDTPGTPMLSAYLRHGLLPTLLLLLAACGH
QTPAPKPSPVGILHPPNPYRALPDHTRHSGVFPRPAALEAQVAFWRNVYATWGRAVVVIH
DDRYLDTVYEVLEFPTVGESLTADQKAWVANRRSYWQDRLYTLESKLDTGAALDAEDRAT
AALLTGGQRRDLRAVAHNAAKRVRSQRGMRERFLRGLEIGTRYEARFRKIFRDNGLPEEL
AYLPHVESSFQAAARSSAGAVGIWQFTKGAAEKFMPMNGAADPRLDPIASTQGAARYLKY
AYANIGNWPMAITSYNHGINGMKRARGRYGHDFMRMVEEYDSPLFGFASRNYYAEFLAAR
EIASQPERYFSELAPGIQSPDANQP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggcgtttccacgcggggcatccggttcgaccgggatcgcctccgggcgctacgc
atcatcagccccgcctgggtcttccaggacggggatacaccgggaacccccatgctttcc
gcttatctacgccacggcctcctgccgacgctgctgctgttgctggccgcttgcggccat
caaacccccgcgcccaaacccagcccggtcggcatcctccacccccccaatccctaccgc
gccctgcccgaccacacccgccattccggcgtcttccccaggcccgccgcgctggaagcc
caggtggcgttctggcgcaatgtctatgcgacctgggggcgtgcggtggtggtcatccac
gacgaccgctatctcgacaccgtctacgaagtgctggaattccccaccgtcggggaaagc
ctcaccgccgaccagaaagcctgggtcgccaaccgccggagctattggcaggaccgcctg
tataccctggaaagcaagctcgacaccggcgcggccctggacgcggaagaccgcgccacc
gccgccctgctgaccggcggccagcgccgcgacctccgcgccgtggcccacaacgccgcc
aagcgcgtccgctcccaacgcgggatgcgcgagcgcttcctgcgcggcctggaaatcggt
acccgctacgaggcgcggttccgcaagattttccgcgacaacggcctgcccgaggaactg
gcctacctgccccatgtggaatcctcgttccaggcggcggcgcggtcctcggcgggggcg
gtcggcatctggcagttcaccaagggcgcggcggagaaattcatgcccatgaacggtgcc
gccgacccccggctcgatcccatcgcctccacccagggcgcggcgcgttacctgaaatac
gcctatgccaatatcggcaattggccgatggcgatcacctcctacaaccacggcatcaac
ggcatgaaacgcgcccgtggccgctacggccatgatttcatgcgcatggtggaggaatac
gacagccccttgttcggtttcgcttcgcgcaattattacgccgaattcctggccgcccgc
gaaatcgccagccagcccgagcgttatttctcggaactggcaccgggtatccagtccccg
gacgcaaaccaaccctag
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