Methylomagnum ishizawai: MishRS11D_44270
Help
Entry
MishRS11D_44270 CDS
T07434
Name
(GenBank) HlyB/MsbA family ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MishRS11D_44270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
misz02000
]
MishRS11D_44270
Enzymes [BR:
misz01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MishRS11D_44270
Transporters [BR:
misz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MishRS11D_44270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
RsgA_GTPase
AAA_22
AAA_29
AAA_30
MeaB
AAA_25
nSTAND3
AAA_33
AAA_5
MMR_HSR1
DUF5906
nSTAND1
NACHT
AAA_23
AAA_28
Zeta_toxin
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BBL77329
LinkDB
All DBs
Position
pRS11DPr2:105000..106826
Genome browser
AA seq
608 aa
AA seq
DB search
MAFRNVFSGELDTFRALLPLLAPYRWAVAGFVVLGLLASLLEGLGIGLMIPLLQGYAVPA
GNGGGPLLDGLERLAAAFPAESRSATLMGLVFAAILVKIVLAYLFTGLAAWIRSRVVYDL
RIRMYRQILALSQAYLDAAPTGTLLQTLTTNAAETAYSATCLLWLALNISAVLVFALLLA
AIAWKTTLAVLAVLLLLSKLVRAALGGVKALGQRNLGLYNEISHLIKETLAGLRTIHAFG
RETYELGRFEAAHLASHRLEFKQERMVALAHPLSEGLAAMVLMGLVILALRTGLSLPILA
TLVFMLLRLLPHIQSANTQITVILSRSAAVCSVLDLLDGRGKLYPKAGSARFGGFRRDIH
FERVCFGYQGKEQPALQDIDLRIGRDQTVALVGPSGAGKSTLIHMLCRFYEPSGGRILVD
GRDLAEFDLASWRERIALVGQDVHIFNATVRDNIAYGRLEAGPADIVAAARRAHAHNFIA
DLPQGYDTLLGDRGVLLSGGQRQRISIARAILRDPDILILDEATNALDAVSETHIQAAIE
ALGRSRTVLVVAHRLSTIERADRIVVLDQGRVAEQGRFDELLERGGLFATLYRGHRLGLV
EPAAEVSA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcatttcggaacgttttttccggcgaattggataccttccgcgccttgctgcctttg
ctcgcgccctatcgctgggcggtggccggcttcgtggtgctgggcctgctggcttcgcta
ctggaggggttgggcatcggtttgatgattcccttgctccagggctatgccgtccccgca
ggcaatggcggtggcccgctgttggatgggctcgaacgcctggccgcagccttcccggcg
gaatcgcgcagcgccacgctcatggggctggtgttcgccgcgatcctggtcaagatcgtg
ctggcctacctgttcaccggcttggcggcctggatcaggagccgggtggtttacgacctc
cgcatccgcatgtatcgccagatcctggcgctatctcaggcatacctggacgcggcaccg
acaggcaccttgttgcagaccctcaccaccaacgcggcggaaaccgcttactcggcaact
tgcctgctgtggttggcgctcaatatcagcgcggtattggtgttcgccctgttgctggcg
gccatcgcctggaaaacgacgttggcggtcctggccgtgctgttgctgctttccaagttg
gtgcgggcggcgctgggcggggtgaaggcgctgggccagcgcaacctggggctttacaac
gaaatcagccatctcatcaaggaaaccctggccggcctccgcaccatccacgcctttggc
cgggaaacctacgagctggggcgcttcgaggcggcgcacctcgccagccaccgcctggag
ttcaagcaggagcgcatggtggccttggcccatcccttgtcggaaggtttggccgccatg
gtgctgatgggtttggtcatcctagcgttgcggaccggcctgagcttgccgatactggcc
accctcgtattcatgctgctcaggctgttgccgcacatccaaagcgccaatacccaaatc
acggtgatcctgtcgcggagcgcggcggtgtgctcggtattggacttgctggacgggcgc
ggcaaactctatcccaaggcggggagcgcccgtttcgggggattccggcgcgatatccat
ttcgagcgggtctgtttcggctatcagggcaaggaacagcccgctctgcaagacatcgac
ctgcggatcgggcgcgaccagaccgttgccttggtaggcccgtccggcgcgggcaaatcg
acgctgatccatatgttgtgccgtttctacgaacccagcggcgggcgcatcctggtcgat
gggcgggatttggcggaattcgatctggcttcctggcgggaacgtatcgccctggtcggc
caggatgtgcatatcttcaacgccacggtgcgggacaacatcgcctatggccggttggaa
gccggcccggcggatatcgtcgccgccgcccgccgcgcccatgcccataatttcatcgcc
gacttgccccaaggttacgacacgttgctgggcgaccggggcgtattgttgtccggcgga
caacggcagcggatttccatcgcccgcgccatcttgcgcgacccggatattttgatcttg
gacgaagccaccaacgccctggacgccgtctccgaaacccatatccaagccgccatcgaa
gcgctgggccggagccgcacagtgctggtcgtggcccatcgcctatccaccatcgagcgg
gccgaccgcatcgtggtgttggatcaaggccgggtggcggaacagggccgtttcgacgaa
ttgctggagcgggggggcttgttcgccactttgtaccggggccaccggctgggcttggtc
gaaccggcagcggaggtgtcggcatga
DBGET
integrated database retrieval system
