Mycobacterium intracellulare MOTT-02: OCO_00030
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Entry
OCO_00030 CDS
T01754
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCO_00030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_00030
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OCO_00030
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
ABC_tran
DUF2813
Motif
Other DBs
NCBI-ProteinID:
AFC46367
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Position
3271..4428
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AA seq
385 aa
AA seq
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MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL
IRAGAARAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE
DLALVRGDPSERRRYLDDLATLRRPAVAAVRADYEKVLRQRTALLKSLSGARYRGDHSAL
DTLDVWDSRLAEHGAELMSARIDLVNQLTPEVEKAYQLLAPGSRAASISYRSSLGADAAA
DIAGGDREFLEAALLAALAERRGAELERGMCLVGPHRDDLELWLGDQPAKGFASHGESWS
FSLALRLAAYELLRADESDPVLLLDDVFAELDATRRRALATVAESAEQVLVTAAVVEDIP
AGWDVRRVYVDLHDGDSGRVSEMRA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtccggcatttaggactgcgcgacttccggtcctgggcacacgccgacctcgaa
ttgcaacccggtcggacggtcttcatcggttccaacgggttcgggaagacgaatctcctt
gaggcgctgtggtattcgagcactctgggttcacaccgggtgggaaccgacgcgccgttg
atccgggccggtgccgcccgggcggtcgtttccacgatcgtggtcaacgacggcagggaa
tgcgccgtcgatctggaaatcgccgcggggcgggcgaacaaggcgcggctgaatcgctca
ccggtgcgcagcacccgcgaggtcatcggcgtcttgcgcgcggtgttgttcgcccccgag
gacttggcgctggtgcgcggcgacccgtcggagcgacgccgctacctcgacgacctggca
acgctgcgtcggccggccgtggcggcggtgcgtgccgactacgagaaagtgctgcggcag
cggaccgcgctgttgaaatccctgtctggcgcgcggtacaggggcgatcacagtgcgctg
gacacgctcgacgtttgggacagtcgcctggccgaacacggggccgaattgatgtccgcc
cgtatcgatttggtgaaccagctgacgcccgaggtggagaaggcctatcaactgctggct
ccgggatcacgtgccgcgtcgatcagctaccgttccagcctgggcgccgacgccgcggcg
gacattgccggcggggaccgcgaattcctcgaggccgctctgttggccgcgttggcggag
cgccgcggtgcggagttggagcgcggcatgtgtttggtcggtccgcaccgggacgacttg
gagctgtggctcggcgatcagccggcgaaaggctttgccagccatggggaatcgtggtcg
ttctcgttggcgctgcgactcgccgcctacgagctgttgcgcgccgacgaaagcgacccc
gtgttgttgctcgacgacgtcttcgccgagctcgacgcgacccggcgccgcgccctggca
accgtggccgaatcggccgagcaggtgctggtcaccgccgcggtcgtcgaggacatcccg
gcgggctgggacgttcgacgggtctacgtcgacctgcatgacggcgactcgggccgggta
tcggagatgcgcgcatga
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