Mycobacterium intracellulare MOTT-02: OCO_03340
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Entry
OCO_03340 CDS
T01754
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03030
DNA replication
mit03430
Mismatch repair
mit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCO_03340
03430 Mismatch repair
OCO_03340
03440 Homologous recombination
OCO_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mit03032
]
OCO_03340
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_03340
Enzymes [BR:
mit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCO_03340
DNA replication proteins [BR:
mit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCO_03340
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCO_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DNAX_ATPase_lid
AAA_30
DnaX_C
Mg_chelatase
AAA_19
Rad17
AAA_16
AAA_14
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFC46698
LinkDB
All DBs
Position
339844..341667
Genome browser
AA seq
607 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSIALEAGRINHAYLFSGPRGCGKTSSARILARSLN
CAQGPTATPCGVCDSCQALAPNAPGSIDVVELDAASHGGVDDTRELRDRAFYAPAQSRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLPPK
TMRALIGRICEQEGVVVDDAVYPLVIRAGGGSPRDTLSVLDQLVAGAEGAHVTYQRALGL
LGATDMALIDDAVDALAAADAAALFGAVESVIDAGHDPRRFATDLLERFRDLILLQAVPD
AAARGVVDGPEDVLERMRDQSTRLGTATLTRYAEVVQAGLGEMRGATAPRLLLEVVCARL
LLPSASDTEAALLQRVERIETRLDMSIPGSEATAGRPAEPADRPVRFTRPSAAAPKPEPK
PEPKPEPKAEPAPAPEPPPAPATAPSPAAETSSAPGELNAAAVRSMWSTVRDKVRQRSRT
TEVMLAGATVRAIEDNTLVLSHESAPLAKRLCEQRNADVIAEALKDALGVNWRVRCEAGT
PAQAAANPLTPQPEEPAPEPDSARRAEEEHLLAEAVRDQPSGPRRDPEEVALELLQNELG
ARRIDNG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggccctctaccgcaagtaccgtccggcaaccttcgccgaagtggtggggcaggagcac
gtcaccgagccgctgtcgatcgcgctggaggccggccggatcaaccacgcgtacctgttc
tcgggtccgcgcggctgcggcaagacctcctcggcgcggatcctcgcccggtcgctgaac
tgcgcccaggggccgacggccaccccctgcggggtctgcgactcgtgccaggccctggcg
cccaacgcgcccggcagcatcgacgtcgtcgagctcgacgccgccagccacggcggtgtc
gacgacacccgcgagctacgcgaccgcgcgttctacgcgccggcgcagtcgcgctaccgg
gtgttcatcgtcgacgaggcgcacatggtgaccaccgcggggttcaacgcgctgctcaag
atcgtggaggaaccccccgagcacctcatcttcatcttcgccaccaccgagccggagaag
gtgctgccgacgatccggtcgcgcacccatcactacccgttccggctgttgccgccgaag
accatgcgggcgttgatcggccggatctgcgagcaggagggcgtcgtcgtcgacgacgcg
gtctacccgctggtgatccgcgccggcggcggctcgccccgcgacaccctgtcggtgctc
gaccagctggtggccggcgccgagggcgcccacgtgacctaccagcgggccctgggcctg
ctgggggccaccgacatggcgttgatcgacgacgccgtggacgcactggccgccgccgat
gccgcggcgctgttcggcgcggtggagtcggtgatcgacgcgggccacgacccccggcgt
ttcgccaccgatctgctggagcggttccgcgatctgatcctgctgcaggccgtcccggac
gcggcggcccgcggcgtggtggacggaccggaggacgtgctggagcggatgcgcgaccag
tcgacccggctcgggacggcgaccctgacccgctacgccgaggtggtgcaggcggggctg
ggggagatgcggggcgcgacggcgccgcgcctgttgctcgaggtcgtgtgcgcgcggctg
ctgttgccctcggccagcgacaccgaagccgcgctgctgcaacgcgtcgagcggatcgag
acccggctggacatgtccattcccggctcggaggccaccgcgggccggccggccgagccc
gccgaccggccggtccgcttcacccgaccgtccgcggctgcccccaagcccgagccgaag
cccgagccaaagcccgagccgaaggccgagcccgcgccggcacccgagcctcctccggcg
cccgccaccgccccctcgccggcggccgaaacatcctctgcgcccggcgaactcaacgcc
gcagcggtgcgcagcatgtggtcgaccgtgcgcgacaaggtccgtcagcgcagccgcacc
accgaggtgatgctggccggcgccaccgtccgggcgatcgaggacaacacgttggtgctg
agccacgaatcggcgccgctggccaagcggctgtgcgaacagcgcaacgccgacgtcatc
gccgaggcgctcaaggacgcgctgggagtcaactggcgggtgcggtgcgaggccggcacg
ccggcgcaggccgcggccaacccgctgacaccgcagcccgaagagcctgcccccgaaccg
gattcggcccggcgagccgaggaagaacacttgctcgccgaggccgtccgcgaccagccg
tcgggcccgcgccgcgatccggaagaggtcgcgctcgaactgctccagaacgagctcggc
gcgcgccgcatcgacaacggctga
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