Mycobacterium intracellulare MOTT-02: OCO_04280
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Entry
OCO_04280 CDS
T01754
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mit03032
]
OCO_04280
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_04280
Enzymes [BR:
mit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OCO_04280
DNA replication proteins [BR:
mit03032
]
Prokaryotic type
DNA Topoisomerases
OCO_04280
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCO_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFC46792
LinkDB
All DBs
Position
427018..429831
Genome browser
AA seq
937 aa
AA seq
DB search
MADPKLKDSAGGGNGSRRRLVIVESPTKARKLAGYLGSSYIVESSRGHIRDLPRAAADVP
AKYKSEPWARLGVNVDHDFEPLYIISPEKKSTVTELKGLLKDVDELYLATDGDREGEAIA
WHLLETLKPNIPVKRMVFHEITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDIVAQLDASVSDPQASPPTFS
ARLTNVDGLRVATGRDFDSLGQLRKADEVTILDEPSATELAAGLRGAQLSVASVEEKPYT
RRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSAINAARN
QARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELI
WQRTVASQMADARGTTLSLRIGGRSGERQVVFSASGRTITFPGFLKAYVETVDELAGGEA
DDAESRLPQLTQGQRLDAIELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSIIKT
IQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGQERRTDW
LNNFYFGGEHGVADSVARSGGLKKLVGVNLEGIDAREVNSIKLFDDEQGRPVYVRVGKNG
PYLERMVTGDDGERTPQRANLNDSLTPDELTLELAEQLFATPQEGRVLGVDPATGHEIVA
KDGRYGPYVAEVLPEPPPGDDEGGAAPAKKGKKPTGPKPRTGSLLRTMDLQTVTLEDALR
LLSLPRVVGVDPESGEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLEEALKIYAEPK
RRGRQGATAPPLRELGADPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERAA
ELLADRRARGPAKRPAKKAARKSPAKKSAAKKTAKRS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaactgaaggacagcgccggcggcggcaacggaagccgccggcgactc
gtgattgtcgagtcgcccaccaaggcgcgcaaactggccgggtacctgggctccagctac
atcgtcgagtcgtcgcgcggccacatccgcgacctgccccgggccgccgccgacgtgccc
gccaagtacaagtcggagccgtgggccaggctgggcgtgaacgtcgaccacgacttcgaa
ccgctctacatcatcagcccggagaagaagagcaccgtcaccgagctcaagggcctgctc
aaggacgtcgacgagctctatctcgccacggatggcgaccgcgagggcgaagccattgcc
tggcacctgctggagaccctcaagcccaacatcccggtcaagcggatggtgttccacgag
atcaccgagccggcgatcctggaggccgccgaaaatccccgcgacctcgacatcgatctc
gtcgacgcgcaggagacccgccgcatcctggaccgcctgtacggctacgaggtcagcccg
gtgctgtggaagaaggtcgcgcccaagctgtcggcgggccgggtccagtcggtggcgacc
cggatcatcgtgcagcgcgagcgcgaccgcatggcgtttcgcagcgcgtcctactgggac
atcgtggcccagctcgacgccagcgtgtccgacccgcaggcgtcgccgcccaccttctcc
gcccggctgaccaacgtcgacggcctgcgcgtcgccaccggacgcgacttcgactcgctg
ggacagctgcgcaaggccgacgaggtcaccatcctcgacgaaccaagcgcgaccgagttg
gccgccgggctgcgcggcgcccagctgtccgtcgcctcggtcgaggagaagccctacacg
cgccggccgtacgcgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagctg
cggttctcctccgagcgcaccatgagcatcgcccagcggctctacgaaaacggctacatc
acctatatgcgtaccgactcgaccacgttgtcgcagtcggcgatcaacgccgcccgcaac
caggcgcgtcagctctacggcgaggagtacgtctcgccgtccccacgccagtacacccgc
aaggtgaagaacgcccaggaggcgcacgaggcgatccggcccgccggcgagacgttcgcc
accccggacgcggtgcgacgcgaactcgacggcgacgaattccggctctacgagctgatc
tggcaacgcacggtggcctcgcagatggccgacgcgcgcggcaccacgctgagcctgcgt
atcgggggccgctccggcgagcgtcaagtggtgttctccgccagcggtcgcaccatcacg
ttccccggcttcctgaaggcctacgtggagacggtggacgagttggccggcggcgaggcc
gacgacgccgagagccggctgccgcagctcacccagggccagcggctggacgccatcgaa
ctcacgcccgacggccacgccaccaacccgccggcccgctataccgaggcgtcgttggtc
aaggcgctcgaggaactgggcatcggccgcccgtcgacgtattcgtccatcatcaagacc
atccaggaccgtggctacgtgcacaagaagggcagcgccctggtgccctcctgggtcgcg
ttcgccgtaaccggtttgctggagcagcatttcggccggctggtcgactacgacttcacc
gccgcgatggaggacgagctcgacgcgatcgcctcgggccaggagcggcgcaccgactgg
ctcaacaacttctacttcggcggcgagcacggggtggccgattcggtggcccggtccggc
ggcctgaagaagctcgtcggcgtcaacctggaaggcatcgacgcccgagaagtcaactcc
atcaagctctttgacgacgagcagggccgtcccgtctacgtccgggtgggcaagaacggg
ccgtacctggagcgcatggtgaccggcgacgacggcgagcgcacgccgcagcgggccaac
ctcaacgactcgctgacccccgacgaattgaccctcgagctggccgagcagctgttcgcc
acgccacaggagggacgggtgctgggcgtggacccggcgacgggccacgaaatcgtcgcc
aaggacggcagatacggcccgtacgtggccgaggtcctgccggagccgccacctggcgac
gacgagggcggcgccgcacccgcgaagaagggaaagaagcccaccggtcccaaaccccgc
accgggtcgctgctgcgcaccatggatttgcagacggtcacgctcgaggacgcgctgcgg
ctgctctcgctgccccgggtggtcggtgtcgaccccgaatccggcgaggagatcaccgcg
cagaacggccgctacggcccatacctgaagcgcggcaccgattctcgctcgctggccacc
gaggagcagatgttcgacatcaccctcgaggaagcgttgaagatctacgccgagcccaaa
cgccgcggccgccagggcgccaccgcgccgccgctgcgtgagctgggcgccgaccccgcg
accggcaagccgatggtgatcaaggacggccggttcgggccgtacgtcaccgacggcgag
accaacgcgagcctgcgcaagggcgacgacgtgctgtcgatcaccgacgagcgggccgcc
gaactgctggccgaccgccgggcccgcggcccggcgaagcgtcccgccaagaaggccgcc
cgcaagtccccggccaagaagtcggccgccaagaagaccgccaagcgcagctag
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