Mycobacterium intracellulare MOTT-02: OCO_09390
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Entry
OCO_09390 CDS
T01754
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03420
Nucleotide excision repair
mit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OCO_09390
03430 Mismatch repair
OCO_09390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_09390
Enzymes [BR:
mit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCO_09390
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCO_09390
MMR (mismatch excision repair)
Other MMR factors
OCO_09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AFC47303
LinkDB
All DBs
Position
924593..925963
Genome browser
AA seq
456 aa
AA seq
DB search
MIARNSGRRDKRLWTAEGAGELIVGYVADNEHDEARFVAEEIDALADKGEITYNDVAVFY
RTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPGDAVSMRRILNTP
RRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPMLNSRAEKAIAGFVELLDELRGRL
DDDLGDLVESVLERTGYRRELESSSDPQELARLDNLNELVSVAHEFSTDRANADALDESL
HTPEDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAGMVTLMTLHTAKGLEFPVVFVTGWE
DGMFPHMRSLDDPTELSEERRLAYVGITRARRRLYLSRAIVRSSWGQPMLNPESRFLREI
PQELIDWRRTAPAPSFSAPVSGVGRFGPPRAAPTRSGMSKRPLLVLEPGDRVTHDKYGLG
RVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPISKL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcccgcaattccgggcgccgggacaaacgcctgtggaccgccgaaggcgccggc
gaattgatcgtcggctacgtcgccgacaacgagcacgacgaggccagattcgtcgccgag
gagatcgacgcgctcgccgacaagggcgagatcacctacaacgacgtcgccgtcttctat
cgcaccaacaactcgtcgcggtcgttggaagaggtcttcatccgcgccgggattccgtac
aaagtcgttgggggagtgcggttttacgagcgcaaggagattcgcgacattgtcgcctat
ctgcgggtgctggacaaccccggggatgcggtcagcatgcggcgcatcctcaataccccg
cgacggggcatcggagatcgcgccgaggcctgcgtggcggtgtacgccgagaacaccggg
gccagcttcgccgacgcactcgtcgccgcggccgaaggcaaagtgccgatgctgaattcc
cgcgcggagaaggcgatcgcgggtttcgtcgagcttctcgacgagctgcgcggccgcttg
gatgacgatctcggggatctcgtcgagtcggtgctcgaacgcactgggtaccgcagggag
ctggaatcctccagcgatccccaggaactggcgcggttggacaacctcaacgaactcgtc
agtgtcgcacacgaattcagcaccgaccgggcgaacgccgacgcgctggacgagtcgctg
cacacgcccgaagacgaggacgtgccggataccggtgtgctggcggagttcttggaaagg
gtgtcgctggtttccgacagcgacgaaatccccgaggacggcgccggcatggtcacgctg
atgaccctgcacaccgcgaaaggcctcgagtttccggtggtgttcgtcaccgggtgggag
gacgggatgttcccccacatgcggtcattggacgacccgaccgaactgtccgaggagcgg
cggctggcctacgtgggcattacccgggcccggcggcggctgtacctgagcagggccatc
gtccgctcgtcctgggggcagcccatgctcaacccggaatcccgtttcttgcgggagatt
ccgcaagaactgatcgattggcgccgcaccgcgccggcaccgtcgttcagcgcgccggtg
agcggcgtcggacggttcggcccgccgcgcgcggcgcccactcgttccgggatgagcaaa
cgaccgctgctggtgctcgaacccggcgaccgggtgacccacgacaagtacggcctggga
cgggtcgaagaagtttccggcgtcggcgaatcggcgatgtcgctgatcgacttcggcagc
tcgggacgggtcaagctgatgcacaaccacgccccgatcagcaagctctaa
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