Mycobacterium intracellulare MOTT-02: OCO_29980
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Entry
OCO_29980 CDS
T01754
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03030
DNA replication
mit03410
Base excision repair
mit03420
Nucleotide excision repair
mit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCO_29980
03410 Base excision repair
OCO_29980
03420 Nucleotide excision repair
OCO_29980
03440 Homologous recombination
OCO_29980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mit03032
]
OCO_29980
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_29980
Enzymes [BR:
mit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCO_29980
DNA replication proteins [BR:
mit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OCO_29980
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OCO_29980
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCO_29980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_2
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AFC49361
LinkDB
All DBs
Position
complement(3181636..3184362)
Genome browser
AA seq
908 aa
AA seq
DB search
MKAVPATKTATKASEEQTRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAM
LINLLRDEAPTHIAAAFDVSRQTFRSERYPEYKANRSATPDEFHGQIDITKEVLAALGIT
VLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSENVTVLYPRKGVSELTRFT
PDAVVEKYGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIGEYGSLQALVDNVDSV
RGKVGDALREHLASVIRNRELTDLVKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLR
DRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVVGTHLAYDADATA
LAIVSADGEGRYIDTATLDPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLAGVT
SDTALAAYLVRPGQRSFSLDDLSLRYLRRELRAENPEQQQLSLLDDTDGTDDQAVQTLLL
RAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLELLTELQSDFAH
LIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRA
FGVPIEEVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKDQMEQYFARFGGVRDY
LMAVVEQARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
ETDKAIKDAGLSSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccgtgcccgccacgaaaaccgctacgaaggccagcgaggaacagaccaggccg
acgctcatgctgctggacggcaactccctggcgttccgggcgttctatgcgctgcccgcc
gagaacttcaagacccgcggggggctgaccaccaacgcggtctacggcttcaccgccatg
ctgatcaacctcctgcgcgacgaagcccccacccacatcgccgcggccttcgacgtgtcg
cggcagaccttccgctccgagcgctatccggagtacaaggccaatcggtcggcgacgccc
gacgagttccacggccagatcgacatcaccaaggaggtcctggccgctctgggcatcacg
gtgctcgccgagccgggcttcgaggccgacgacctgatcgccaccctggccacccaggcc
gaaaacgagggctaccgcgtgctggtggtcaccggcgaccgcgattcgttgcagttggtc
agcgagaacgtgacggtcctctacccccgcaagggggtgagcgaattgacccgcttcacc
ccggacgcggtcgtcgagaagtacggactgacgcccacgcagtaccccgacttcgccgcg
ctgcgcggcgaccccagcgacaacctgcccggcatccccggtgtgggggagaagaccgcc
tccaagtggatcggcgagtacgggtcgctgcaggcgctggtcgacaacgtcgattcggtg
cgcggcaaggtgggcgacgcgctgcgcgaacatctggccagcgtgatccgcaaccgcgag
ctcaccgatctggtcaaagacgtgccgctggcccagactcccgacacgctgcggctgcaa
ccgtgggaccgcgaccagatccaccggctcttcgacgacctggagttccgggtgctgcgc
gaccgcctgttcgaaaccctggccgcggtggagcccgaggtcgacgagggcttcgacgtg
cgcggcggcgcgctggaagccggcgagctggcggtgtggctggccgagcacagctcgggg
aagcgcttcgggctggccgtcgtcggcacccacctggcctacgacgccgacgccaccgcg
ctggccatcgtctccgccgacggcgagggccgctacatcgacaccgcgacgctggatccc
gaagacgaggcggcgctggcgtcctggctggccgaccccgggccgcccaaggcgctgcac
gaagccaagctggccatgcacgacctggccgggcggggctggacgctggccggcgtcacc
tccgacaccgcgctggcggcctacctggtgcgccccgggcagcgcagcttctccctcgac
gacctgtcgctgcgctacctgcgtcgcgagttgcgggccgaaaaccctgagcagcaacag
ctttcgctgctcgacgacaccgacggcaccgacgaccaggcggtgcagacgctgcttttg
cgtgccgtggcggtgctggatctggccgacgcgctcgacgaggagctggcccgcatcaac
tccacctcgttgctcagcggcatggagctgccggtgcagcgggtgctggcggggatggaa
aacgccggcatcgccgtcgatttggagttgctgaccgaactgcagagcgacttcgcccac
ctgatccgcgacgcggccgaagcggcgtacgcggtgatcggcaagcagatcaacctgggc
tcgccgaaacagttgcaggcggtgctcttcgacgagctggagatgccgaagaccaagcgc
accaagaccggatacaccaccgacgcggacgcgctgcagtcgctgttcgacaagaccggt
cacccgttcctgcaacatctgctggcccaccgcgacgccaccaggctcaaggtcaccgtc
gacgggctgctgaattcggtggcctccgacgggcgcatccacaccacgttcaaccagacc
atcgcggccaccggcaggttgtcctcgaccgagccgaacctgcagaacattccgatccgc
accgaggccggccggcggatccgcgacgcgttcgtggtcggcgacggctacagcgagctg
atgaccgccgactacagccagatcgagatgcggatcatggcccacctgtccaaggacgag
ggactcatcgaggcgttcaacaccggggaggacctgcactcgttcgtcgcctcccgcgcc
ttcggcgtgccgatcgaggaggtcaccgccgaactgcgccgccgggtcaaggccatgtcc
tacgggctggcctatggattgagcgcctacgggctgtccgcccagctcaagatctccacc
gaagaggccaaagaccagatggagcagtacttcgcccggttcggcggagtccgcgactac
ctgatggccgtggtggaacaggcccgcaaggacggctacacgtcgacggtgttcggccgc
cgccgctatctgcccgaactcgacagcagtaaccgccaggtgcgcgaggccgccgagcgg
gcggcgctcaacgcgcccattcagggcagcgccgccgacatcatcaaggtggcgatgatc
gaaaccgacaaggcgatcaaggacgccgggctgtcctcccggatcctgctgcaggtgcac
gacgagctgctgttcgaggtcgcggcgggggagcgcgagcagctcgaagcgttggcccgc
gacaagatgggcggcgcctacccgttggacgtcccgctcgaggtttcggtgggctacggc
cgcagctgggacgctgcggcgcactga
DBGET
integrated database retrieval system
