Mycobacterium intracellulare MOTT-02: OCO_35020
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Entry
OCO_35020 CDS
T01754
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCO_35020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mit03019
]
OCO_35020
03016 Transfer RNA biogenesis [BR:
mit03016
]
OCO_35020
Enzymes [BR:
mit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OCO_35020
Messenger RNA biogenesis [BR:
mit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OCO_35020
Transfer RNA biogenesis [BR:
mit03016
]
Prokaryotic type
tRNA degradation factors
OCO_35020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AFC49865
LinkDB
All DBs
Position
complement(3734980..3737241)
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AA seq
753 aa
AA seq
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MSVAEIEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASK
SPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR
NEIQVVVTVMSLDPNDLYDVLAINAASASTQLSGLPFSGPIGGVRVALIDGQWVAFPTVE
QLERAVFDMVVAGRIVGGGAAEKDIAIMMVEAEATENVIELVEGGAQAPTETVVAEGLEA
AKPFIATLCTAQEELAGAAAKPVGEFPTFPDYQEDVYYSVASVATDELAKALTIGGKAER
DARTDELKAEVLARLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRAL
SAEVAVVPRAHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFST
GETGRVGSPKRREIGHGALAERALIPVLPGVEDFPYAIRQVSEALGSNGSTSMGSVCAST
LSLLNAGVPLKAPVAGIAMGLVSDDVEIDGRTERRFVTLTDILGAEDAFGDMDFKCAGTK
DFVTALQLDTKLDGIPSQVLAGALGQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKV
PVDKIGEVIGPKGKVINGITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQL
PTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIA
DIDKRGKISLVLVEDDNSAPADAPAAAPADAAS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctgaaattgaagagggcgtgttcgaggcgaccgccaccatcgacaacggg
agcttcggcacccgcaccatccgtttcgagaccggccggctggcccagcaggccgccggc
gccgtggtcgcgtacctggatgacgaaaacatgctgttgtcggcgaccaccgccagcaag
agccccaaggagcacttcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtac
gccgccggtcgcatccccggctcgttcttccgccgcgagggccgtccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgttcgtcagcggactgcgc
aacgagatccaggtcgtggtcacggtcatgagcctggaccccaacgacctgtacgacgtg
ctggcgatcaacgccgcgtcggcctccacccagctgagcgggctgccgttctcgggtccg
atcgggggcgtgcgggtcgcgctcatcgacggccagtgggtggcgttcccgaccgtcgag
cagctcgagcgggcggtgttcgacatggtggtggccggccgcatagtcggcggcggcgcc
gccgaaaaagacatagcgatcatgatggtcgaggcggaggccaccgagaacgtcatcgag
ctcgtcgagggcggcgcccaggcgccgacggaaaccgttgtggccgaagggctcgaggcc
gccaagccgttcatcgccaccctgtgcaccgcgcaggaggagctggccggggcggccgcc
aagccggtcggcgagttcccgacgttcccggactaccaggaagacgtctactactcggtc
gcctcggtggccaccgacgagctggccaaggcgctgaccatcggcggcaaggccgagcgc
gacgcgcgcaccgacgagctgaaagccgaggtgctcgcacgcctcgccgaaacctacgag
ggccgcgagaaagaggtcagcgccgcgttccgctcgctgaccaagaagctggtgcgccag
cgcatcctcaccgatcacttccgcatcgacggccgcggcatcaccgacatccgcgcgctc
tcggccgaggtcgccgtggtgccccgcgcgcacggcagcgcgctcttccagcgcggtgag
acccagatcctgggggtgaccacgctcgacatggtcaagatggcccagcagatcgactcg
ctggggccggaaacctccaagcgctacatgcaccactacaacttcccgccgttctccacc
ggcgagaccggccgggtgggttcgcccaagcggcgcgagatcgggcacggcgcgctcgcc
gagcgggccctgatcccggtgctgcccggcgtcgaggatttcccgtacgccatccgccag
gtctccgaggcgctgggctccaacggctcgacgtcgatggggtcggtctgtgcgtccacc
ctgtcgctgctgaacgccggtgtgccgctgaaggcgccggtggccggcatcgcgatgggc
ctggtctccgacgacgtcgagatcgacggtcgcaccgagcggcggttcgtcacgctgacc
gacatcctgggcgccgaggacgcgttcggcgacatggacttcaagtgcgccggcaccaag
gacttcgtcaccgcgctgcagctggacaccaagctcgacggcatcccgtcgcaggtcctg
gcgggcgccctgggccaggccaaagacgcgcgcctgacgatcctcgaggtcatggccgag
gccatcgacgcgcccgacgagatgagcccgtatgccccgcgggtcaccaccatcaaggtt
ccggtggacaagatcggtgaggtcatcggccccaagggcaaggtgatcaacggcatcacc
gaggagaccggcgcgcagatctccatcgaggacgacggcaccgtgttcgtcggcgccacc
gacgggccctcggcgcaggccgcgatcgaccggatcaacgccatcgccaacccgcagctg
ccgacggtcggcgaacgtttcctcggaaccgtggtcaagacaacggatttcggcgccttc
gtctcgctgctgcccggtcgcgacggcctggtgcacatctccaagctcggcaagggcaag
cgcatcgcgaaggtcgaggacgtggtgaacgtcggcgacaagctgcgcgtcgaaatcgcc
gacatcgacaagcgcggcaagatctcgctggtgctggtggaggacgacaactcggcgccc
gccgatgccccggcggccgcccctgccgatgccgcgagctga
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