Mycobacterium intracellulare MOTT-02: OCO_36210
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Entry
OCO_36210 CDS
T01754
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCO_36210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_36210
Enzymes [BR:
mit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OCO_36210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OCO_36210
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OCO_36210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AFC49984
LinkDB
All DBs
Position
complement(3853820..3854668)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG
KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISALLDDGTVLSFADQRTFGGWMLA
DLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQQVVSGIGNIYA
DEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTSFDSLYVNVNGESGYFD
RSLDAYGREGQGCRRCGAVMRREKFMNRSSFYCPKCQPRPRV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaggtggtgcgccgcggcctgcacgcccatgtggtgggc
aagacgatcacggccgtccgggtgcaccacccgcgcgcggtccgacgccacgaggcgggg
gccgcggacctgaccgcccgactcctcaacgaccggatcaccggcaccgaccggcgcggt
aagtacctgtggctgctgctcgacagcgacgcggcgctcgtcgtgcacctcggcatgagc
gggcagatgctgctcggcgcggtgccgcgcgccgaccacgtccggatctccgccctgctc
gacgacgggaccgtgctgagcttcgccgatcagcgcaccttcggcgggtggatgctcgcc
gacctggtcgaggtggacggcagcgtggtgcccgaacccgtcgcgcacctggcgcgtgac
ccgctggacccccggttcgacgccgacgccgtcgtaaaggtcttgcggcgcaagcactcc
gaaatcaagcgccagctgctcgaccagcaggtggtgtcgggcatcggcaacatctatgcc
gacgaggcgctgtggcgggccaaggtgcacggggcgcggatcgccgacgcgctgacccgc
aagcagttgaccgccgtgctcgacgcggccgccgacgtgatgcgtgacgcgctggccaag
ggcgggacctcgttcgattcgctgtatgtcaacgtcaacggcgaatccggatacttcgac
cgctcactggacgcctacggccgcgaaggccagggctgccgccgctgcggcgcggtgatg
cgcagggagaagttcatgaaccgctcgtcgttctattgcccgaaatgccaaccgcgcccg
cgtgtttga
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