Mycobacterium intracellulare MOTT-02: OCO_39310
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Entry
OCO_39310 CDS
T01754
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mit03032
]
OCO_39310
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_39310
Enzymes [BR:
mit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OCO_39310
DNA replication proteins [BR:
mit03032
]
Prokaryotic type
DNA Topoisomerases
OCO_39310
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCO_39310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFC50294
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All DBs
Position
4153597..4154655
Genome browser
AA seq
352 aa
AA seq
DB search
MMRLRRSVLSKPGIARKRRGKGFSYYEPGGKPVSDPETLQRIKDLVIPPAWKKVWISPHP
NGHIQAVGVDAAGRRQYLYHSAWQAERAEEKFDRVLELSTRLPACRAQIAKDLARHGLTR
KRVLALALRLLDRGYFRAGGEQYAEEHESYGLSTLLCEHVVVRRDAVEFDFPAKSGVRRT
VEIEDPDVVRAVRALMRRPDRTERLLVCRNSSGWIDVRADDLNARFKELAGDDYTVKDLR
TWHGTVLAAAAFADADPAVSGRVAKRVEAAVMKEVAEELGNTPAVARGSYVDPRVVTGYE
QGLTIAAAARRAERAKSPDLAQEILDKATRMLIRRVAKADSANGSSGLRKTA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgcgtcgcagcgtgctgagcaagccgggaatcgcgcgcaagcgtcgcgga
aagggcttctcctactacgagccgggcggcaagccggtttccgatccggaaaccctgcag
cgcatcaaggatctggtcatcccgccggcgtggaagaaggtgtggatctcgccgcatccg
aacggccacatccaggccgtcggcgtcgacgccgccgggcgccggcagtacctctaccac
tccgcgtggcaggccgaacgcgccgaggagaagttcgaccgggtgctggaactttcgacg
cggcttcccgcgtgccgcgcccagatcgccaaagaccttgcgcgccacggcttgacccgc
aagcgcgtgctggcgctcgcgctgcggctgctcgaccgcggttacttccgcgccggcggc
gagcaatacgccgaggagcacgagtcctacgggttgtccaccctgctatgtgagcatgtg
gttgtccggcgtgacgccgtcgaattcgactttccggccaagagcggggttcggcgcacc
gtggaaatcgaggaccccgacgtggtccgcgcggtgcgtgcgctgatgcgcaggcccgac
cgcaccgagcgattgctggtgtgccgcaactcttccgggtggatcgatgtgcgcgccgat
gacctcaacgcccgattcaaggagctggccggcgacgactacaccgtcaaggacctgcga
acgtggcacgggacggtgctggcggccgcggccttcgccgacgccgacccggcggtatcg
ggccgggtggccaagcgcgtcgaggccgccgtgatgaaagaggtcgccgaggagctgggc
aacacgcccgcggtggcgcgcggttcctacgtggatccccgcgtcgtcaccggctatgag
cagggtctgaccatcgccgcggcggcgcgccgcgccgagcgcgccaaatcgcccgacctg
gcgcaggagattctggacaaggccacccgaatgctgatccggcgcgtggccaaggccgac
agcgccaacggatcgtccggcctgcgcaagacggcatga
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