Mycobacterium intracellulare MOTT-02: OCO_40070
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Entry
OCO_40070 CDS
T01754
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03420
Nucleotide excision repair
mit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OCO_40070
03430 Mismatch repair
OCO_40070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_40070
Enzymes [BR:
mit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCO_40070
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCO_40070
MMR (mismatch excision repair)
Other MMR factors
OCO_40070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFC50370
LinkDB
All DBs
Position
complement(4238358..4241705)
Genome browser
AA seq
1115 aa
AA seq
DB search
MNARYNPSELACALGLFPPTEEQSAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGY
AEPAQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGPVGDAAAEPEGAPVISTYHAFAGS
LLRDYGLLLPVEPDTRLLSETELWQLAFDVVNGYRGELHTDKTPAAVTSMVLRLWGQLAE
HLVDTGQLRDTHVELERLVHGLPAGPYQRERGPSQWLLRLLGTQTERAELVPLLDALDER
MRAEKVMDFGMQMASAARLAAGFPQVGEDLRARYRVVLLDEYQDTGHAQRIALSALFGGG
VDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLR
VANAVSAEARRRSVAVHALRPRPDAPPGTVRCALLPDVVAEREWIADHLDAHYRRARVEG
VSPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAEVVAMLRLVADPTAG
AAAMRVLTGARWRLGARDIAALWQRARALGGTAGDTAPPSPEAIARAADPSHVDADTVSL
ADAIADPGPAGSYSAAGYQRITALGAELSALRAHLGHPLADLVAEVRRVLGVDCEVRAAA
GVAAGWAGTEHLDAFADVVAGYAERADGAATRLDASATASVGALLGFLDAAEAVENGLAP
APLAVARDRVQVLTVHSAKGLEWQVVAVAHLSGGTFPSTASRSTWLTDAAELPPLLRGDR
AAAGALGIPVLDTSDVTNRKQLSDKISEHRRQLDQRRVDEERRLLYVAITRAEDTLLVSG
HHWGATGVKPRGPSDFLVEIKDVIDRAAVAGDPCGTVEHWAPSPADGERNPLRDNVIEAV
WPADPLAVRREEVERGATLVRRALAAGPGRPCADVDGWAADVDALLAERARLIEPPVREL
PGQLSVSSLVGLARDPAGTAQRLRHRLPSRPDPHALLGNAFHSWVQKFYGAECLFDLGDL
PGAADSDVGDSAELAALQAAFTESPWAARSPVAVEVPFEMPIGETLVRGRIDAVFADPDG
GATVVDWKTGEPPHGAEALRQAAVQLAVYRMAWAALAGVAESSVRTAFYYVRAGTTVVPD
ELPSAAELAGLLIDPDGTRCDPRRPSIGEAVPVVT
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccgctacaatccgagcgaattggcttgcgcgctcggccttttcccgccgacc
gaggagcagtccgcggtcatcgccgcgccgccgggcccgctggtcgtcatcgcgggggcc
ggagccggtaagaccgagaccatggccgcacgggtggtgtggctgatcgccaacggctac
gccgaacccgcccaggtgctgggactgacgttcacccgcaaggccgccggccagctgctg
cgccgcgtccggtcccggctggcccggttggccggcgtcggcctgggcccggtcggcgat
gccgccgccgagcccgagggcgccccggtgatcagcacctaccacgcgttcgcgggttcg
ttgctgcgcgactacgggctgctgctgcccgtcgagcccgacacccggttgctcagcgaa
accgagctgtggcagctggctttcgacgtggtcaacgggtaccgcggcgagctgcacacc
gacaagaccccggccgccgtcacctcgatggtgttgcgcctgtggggacagttggccgaa
cacctcgtcgacaccggacagctgcgcgatacccacgttgagctagagcggctcgtccat
ggcctgcccgccgggccctatcagcgggagcgcggtcccagccaatggttactgcgcctg
ctgggcacccagaccgagcgcgcggagttggtgccgctgctggacgcgctcgacgagcgc
atgcgcgccgagaaggtgatggatttcggcatgcagatggcctcggctgcgcggttggcc
gcgggcttcccccaggtcggtgaggacctgcgcgcccgctaccgggtggtgctgctcgac
gagtatcaggacaccggccacgcccagcgcatcgcgttgtcggccctgttcggcggtggg
gtcgacgacgggctggcgctgacggccgtgggcgaccccatccagtccatctacggctgg
cgcggggcctcggcgaccaacctgccccggttcaccaccgactttccccgctccgacggc
acacccgcgcccgtcctggaattgcggaccagctggcgcaatccgccgcgaaccctgcgg
gtcgccaacgccgtgtccgccgaggcgcggcggcgatcggtggccgtgcacgcgctgcgc
cctcgcccggacgccccgcccggcacggtccgctgcgccctgctgcccgacgtggtggcc
gagcgcgagtggatcgccgatcacctcgacgcccactaccggcgggcccgggtggagggt
gtcagccccccgacggccgcggtcctggtgcgccgcaacgccgacgccgcgcccatcgcc
gacgcgctgcgggcgcgcggcatccccgtcgaggtggtcgggctggcagggctcctatcg
gtgcccgaggtcgccgaggtggtggccatgctgcggctggtcgccgacccgacggccggc
gcggcggcgatgcgggtgctcaccggcgcgcgctggcgcctcggcgcccgcgacatcgcc
gcgctgtggcagcgtgcgcgcgcgctcggcgggaccgcgggggacaccgcgccgccctcg
cccgaggcgattgcgcgcgccgccgacccctcgcacgtcgacgccgacaccgtctccctg
gccgacgcgatcgccgacccgggtccggccggctcgtattcggcggcggggtatcagcgg
atcaccgccttgggcgccgagctgagcgccctgcgcgcccacctcggccatcccctcgcc
gacctggtggccgaggtgcgccgcgtgctgggcgtcgactgcgaggtccgggccgcggcg
ggggtggcggcgggttgggccggcaccgagcacctggacgcgttcgccgacgtcgtcgcc
ggttacgccgagcgcgccgacggcgcggccacgcggctggacgcgtccgcaaccgcctcg
gtgggcgcgctgctggggtttctggatgccgccgaggcggtcgagaacggtttggcgccg
gcacctttggccgtcgcgcgcgaccgcgtccaggtgctcaccgtgcattcggcgaaggga
ctcgaatggcaggtggtggcggtcgcgcacctctcgggtgggacgttcccgtcgaccgcg
tccaggagcacttggctcaccgacgccgcggagctgcccccgctgcttcgcggcgaccgc
gccgccgccggggcgctgggcatcccggtgctcgacacctcggacgtcaccaaccgaaaa
caactgtcggacaagatctccgagcatcgccgccagctcgatcagcgacgcgtggacgag
gaacgccgattgttgtatgtcgcgatcacccgggccgaggacaccctgctggtgtccggg
caccactggggcgccaccggggtcaagccgcgcggcccgtcggatttcctggtggaaatc
aaggacgtcatcgaccgtgcggccgtggcgggcgacccctgcggcaccgtggagcactgg
gcgccgtcgcccgccgacggcgagcgaaacccgcttcgcgacaacgttatcgaagcggtg
tggccggcagacccgctggccgtgcggcgcgaggaggtcgagcgcggtgcgacgctggtg
aggcgggcgctcgccgccggacccggccggccgtgtgccgatgtcgacggctgggccgcc
gacgtcgatgcgttgctggccgaacgggcgcggttgatcgagccaccggtccgggaactg
cccggccagctgtcggtcagctccctggtcggcctggcgcgcgacccggcgggcaccgcg
cagcggttgaggcatcggctaccgtcgcggccggatccgcatgcgttgctgggcaatgcg
tttcactcctgggtccagaagttctacggcgcagaatgcctgttcgatctcggcgatctg
ccgggtgcggcggactccgacgtcggcgacagcgccgaattggccgcgctgcaggccgca
ttcaccgaatctccttgggctgcaaggtctcccgtcgccgtcgaggtgccgttcgagatg
ccgatcggtgagaccctggtccgcgggcgcatcgacgcggtgttcgccgatcccgacggc
ggcgcgaccgtcgtggactggaaaacgggcgaaccgccgcacggcgcggaggcgctgcgc
caggccgccgtccagctcgcggtgtaccggatggcctgggcggcgctggccggggtcgcg
gaatcgtcggtgcgcaccgccttctactacgtgcgcgccggcaccaccgtggtccccgac
gaactgccgagcgccgcagagctggccgggttgctgatcgatccggacggtacgcggtgt
gacccgcgccgcccgagtattggggaggcggtgcccgtggttacataa
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