Mycobacterium intracellulare MOTT-02: OCO_41240
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Entry
OCO_41240 CDS
T01754
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mit
Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mit03021
]
OCO_41240
Transcription machinery [BR:
mit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCO_41240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR
Sigma70_ECF
MarR_2
DUF7343
HTH_IclR
KORA
DksA-like_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AFC50487
LinkDB
All DBs
Position
complement(4357414..4358202)
Genome browser
AA seq
262 aa
AA seq
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MTPRAAGGSVSRPNEYADVPDMFRELASVAADSMELQRQRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVDAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPTATELAAELEMDREEVVEGLVAGSSYNTLSIDSGGGGE
EEEARAIADTLGDVDTGLDRIEDQESLRPLLEALPERERTVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLTRLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgcgagctgccggcggttcggtctcgcgtccgaacgagtacgccgatgttccg
gacatgttccgtgagttggcctccgtcgcggccgattccatggaacttcagcgccagcgg
gacaagatcgtcgagcgctgccttccgctggccgaccacatcgcgcgccgcttcgagggc
cgcggcgagccgcgcgacgacctcgtccaggtggcgcgcgtcgggttggtcaacgcggtg
gtgcgtttcgacgtcgacgccggctccgacttcgtttcgttcgcggtgcccacgatcatg
ggcgaggtccgccgccacttccgcgacaacagctggtcggtcaaggtgccgcggcgcctc
aaggaactgcacttgcggctcggcaccgccaccgccgatctgtcccaacggctgggccgt
gcgcccaccgcgaccgaactcgccgccgagctcgagatggaccgcgaagaggtggtcgag
ggcctggtcgccggcagctcctacaacaccttgtcgatcgacagtgggggcgggggcgag
gaagaggaagctcgcgcgatcgccgacaccctcggcgacgtggacaccggcctggaccgc
atcgaggaccaggaatcgttgcgcccgttgctcgaggcgctgcccgagcgggaacgaacg
gtgttggtgctgcggttcttcgagtcgatgacgcagacgcagatcgccgagcgggtcggc
atctcacagatgcacgtctcgcgcctactggcgaaatcgctaacgcggctgcgggaccaa
ttgcaatag
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