Mycobacterium intracellulare MOTT-02: OCO_41340
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Entry
OCO_41340 CDS
T01754
Name
(GenBank) hypothetical protein
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCO_41340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_41340
Enzymes [BR:
mit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OCO_41340
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OCO_41340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AFC50497
LinkDB
All DBs
Position
4369978..4370733
Genome browser
AA seq
251 aa
AA seq
DB search
MPEGDTVWHTAAVLREHLVGATLTRCDVRVPRFATVDLTGEVVDEVVSRGKHLFIRVGRA
SIHSHLKMEGSWRVGERPVRVDHRARIVLEAGTVRAVGVDLGVLEILDRDRDGEAVAHLG
PDLLGEDWDAARAAANLTADPHRPIAEALLDQRVLAGIGNVYCNELCFVSGHLPTAPVGA
IADPLRLVSRAREMLWLNRFRWNRCTTGDTRSGRQLWVYGRAGQRCRRCATPINVDDTKE
RVAYWCPSCQR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtgacaccgtctggcacaccgccgccgtgctgcgcgagcacctggtcggc
gcgacgctgacccgatgcgacgttcgggtgccgcggttcgccaccgtcgacctcaccggc
gaggtggtcgacgaggtcgtcagccgcggcaagcacctgttcatccgggtgggacgggcc
agcattcactcgcatctgaagatggagggcagctggcgggtcggcgagcgcccggtgcgg
gtcgaccatcgggcgcgcatcgtgttggaggccggcaccgtccgggccgtcggcgtcgac
ctgggcgtgctggaaatcctggaccgcgaccgggacggcgaggccgtcgcgcacctggga
cccgatctgctgggcgaggattgggacgccgcgcgtgccgcggccaacctgacggccgac
ccgcaccggccgatcgccgaggcgctcttggaccagcgggtgctggccgggatcggcaac
gtctattgcaacgaattgtgttttgtcagcgggcatctgcccaccgcgccggtgggcgcc
atcgccgatccgctccggctggtctcccgcgcacgagaaatgctgtggctcaaccgcttt
cggtggaatcggtgcaccaccggcgacacccgcagcgggcgccagctctgggtatacggg
cgcgccgggcaacgctgccgtcgctgcgccacccccatcaacgtcgacgacacgaaagag
cgggtggcctactggtgcccgtcgtgtcagcgctag
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