Mycobacterium intracellulare MOTT-02: OCO_43940
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Entry
OCO_43940 CDS
T01754
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCO_43940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_43940
Enzymes [BR:
mit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
OCO_43940
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OCO_43940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFC50757
LinkDB
All DBs
Position
complement(4616492..4617247)
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AA seq
251 aa
AA seq
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MLIGSHVHQDDPLAAAQADGADVVQFFLGNPQSWKKPKPRDDAEALKASTIPLYIHAPYL
INVASANNRVRIPSRKILQDTCDAAAAISATAVIVHGGHADDNDMDAGFERWVKALDYLE
TDVPVYLENTAGGDHAMARHFDTIGRLWDHIGDKGIGFCLDTCHAWAAGEQLIDAVDRIK
ALTGRIDLVHCNDSRDAAGSGADRHANFGTGQIDPELLAAVVKAADAPVICETADEGRKD
DIAFLREKTGG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcggttcgcatgtccaccaggatgacccgctggccgccgcgcaggccgacggc
gccgacgtcgtccagttcttcctcggcaacccgcagagctggaagaagcccaagccgcgt
gacgacgccgaggcgctcaaggcgtcgaccatcccgctctacatccacgcgccctacctg
atcaacgtggcctcggccaacaaccgggtccgcatcccgtcgcgcaagatcctgcaggac
acctgcgacgcggccgcggcgatcagcgcgacggcggtgatcgtgcacggcggccacgcc
gacgacaacgacatggacgccggcttcgaacggtgggtcaaggccctggactacctggaa
acggacgtgccggtctacctggagaacaccgccggcggcgaccacgcgatggcccgccac
ttcgacaccatcggccggctgtgggatcacatcggcgacaagggaattgggttctgcctg
gacacctgccacgcctgggccgccggcgagcagctgatcgacgcggtcgaccgcatcaag
gcgctgaccggccgcatcgacctggtgcactgcaacgactcgagggacgcggcgggctcc
ggcgccgaccggcacgccaacttcggcaccggccagatcgatcccgagctgctcgccgcg
gtggtcaaggccgccgacgccccggtgatctgcgaaaccgccgacgagggccgcaaggac
gacatcgcgttcctgcgggagaaaacgggcggctga
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