Mycobacterium intracellulare MOTT-02: OCO_44340
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Entry
OCO_44340 CDS
T01754
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCO_44340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_44340
Enzymes [BR:
mit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OCO_44340
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCO_44340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFC50797
LinkDB
All DBs
Position
4658492..4661794
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AA seq
1100 aa
AA seq
DB search
MPLHLHRAERTDLLADGLGALLADPPADPFAPELVVVPARGVERWLSQRLSHVLGRARGG
GVSGGVCAGVSFRSPGSLIAEIAGTADDDPWSPEAMAWPLLEAIDHSLDEPWCRPLATHV
GHFHTGAEAELRRGRRYEVARRLAGLFASYARQRPQLLIDWLGGDPGDLDEDLRWQPELW
RALVSRVAADPPHIRHAKTLARLSEAPSDLPARLSLFGHTRLSRTDSELLAALAIHHELH
LWLPHPSDRLWRALAGTRGAIPRREDTSHRAVGHPLLATLGRDLRELQRGLPADAQTDEY
LPGEARPDTLLGWVQSDIAANAVRPQGRALTDDDRSVQIHNCHGPARQVDVLREVLLGLL
ADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVVHGAHPAHQLRVRLADRSLVQTNSLL
AVASQLLGLAGGRVTATEVLNLAQAAPVRARFGFTDDDLEAITRWVRQANIRWGLDQEHR
RPYHVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVPLAGQFAEFVARL
HHVVDSLTGTRTLTEWLATLAGAIASLTRVHESEEWQTGQVQREFAAVLAQAGSRGGTVL
RLPDIRALLTRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLGVVD
GDDALARRPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLAELL
DALDVTTPTKVRHRIVIEHPLQPFDIRNVIPGELVPKVPFSFDPTVLRAARAATGEHTEQ
PKFVAAPLPPPPADDVNLADLVGFFKDPVKGFFRALEFTLPYDVDGVQDAMPVDINGLEE
WTVGDRMLGDILRGMSPDDARQAEWRRGTLPPGQLGWRKVTEIRDQAAALALEALRHRQD
HRSAAAYDVDVDLGAGRRLTGTVSPVYDDALVSVTYSRLDGKHLLESWIPLLALAAHDPG
RDWSAVCIGRMRRGRSIRVEGLGPPDGDPVEVLRELVTIYDAGRREPIPLPIKTSYAWAA
ARHGGDDPAAEARRRWKTSDRFPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECDGEDNR
LGAYAARLWLPMLRAERKLI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatctgcaccgcgccgagcgcaccgatctgttggccgacgggctcggcgct
ctgctggccgatcccccggccgacccgttcgcccccgagctcgtcgtggtcccggcgcgc
ggggtggagcgctggctgagccagcggctgtcgcacgtgctcggtcgggcccgcggcggc
ggggtttccggcggggtgtgcgccggggtttcgttccgcagccccggctcgctgattgcc
gagatcgccggcaccgccgacgacgatccgtggtcgccggaggccatggcgtggcccctc
ctggaggcgatcgaccactcgctggacgaaccgtggtgccgcccgctggcgacccatgtc
ggtcacttccacactggcgcggaggccgagctgcgccgggggcggcggtatgaggtggcg
cgccggttggccgggctgttcgcctcctacgcacggcagcgcccgcaactgctgatcgac
tggctgggcggcgacccgggcgatctcgacgaggacctgcgctggcagccggagctgtgg
cgggcgctggtgtcgcgggtcgcggccgatcccccgcacattcgccacgccaagaccctc
gcgcggctgtccgaggcgcccagtgacctgcccgcgcggctgtcgctgttcgggcacacc
cggttgtcgcgcaccgactccgagctgctcgccgcgctggccatccaccacgagctgcac
ctgtggctgccgcaccccagcgaccggctgtggcgcgcgctggccggcacgcgcggggcg
atcccccgccgcgaggacaccagccaccgcgccgtgggccacccgctgctcgccaccctg
gggcgggacctgcgcgagctgcagcgcggcctgccggcggacgcgcagaccgacgaatac
ctgcccggcgaggcgcgcccggacacgctgctcggctgggtgcagtccgacatcgccgcc
aacgccgtgcggccgcaggggcgcgcgctgaccgacgacgaccggtccgtccagatccac
aactgccacggcccggcccgccaggtcgatgtgctgcgcgaggtgctgctcggcctgctg
gccgacgacccgacgctcgaaccgcgcgacatcctggtgatgtgcccggacatcgaaacc
tatgcgccgctgatcgtggccgacttcggactcggcgacgtggtgcacggcgcgcatccc
gcccaccagctacgggtgcgcctggcggatcgctcactggtccagaccaattcgctgctg
gctgtggcctcccaattgctggggctcgccggcggcagggtgacggccaccgaggtgctc
aacctggcacaggccgccccggtgcgcgcccggttcgggttcaccgacgacgatctggag
gccatcacccgctgggtgcggcaggccaacatccggtggggattggaccaggagcaccgg
cggccctaccacgtcgacttcgtgcacaacacctggcgtttcggcatcgaccggatattg
gccggcgtcgcgatgtccgacgattcgaacgcatggatcgacgcgacgctgccgctcgac
gacgtgagcagcaaccgggtcccgttggccggccagttcgccgaattcgtcgcccggctg
caccacgtggtcgactccctcaccggcacaaggacattgaccgagtggctggccaccctc
gccggcgccatcgcctcgttgacgcgggtgcacgagtccgaggagtggcagaccggtcag
gtgcaacgggagttcgccgcggtcctggcgcaggccgggtcacggggcggcacggtgctg
cgactgcccgacatccgcgcgctgctgacccggcacctcgccgggcgcccgacgcgggcc
aacttccgcaccggcacgctgacggtgtgcaccatggtcccgatgcgctcggtcccccac
cgggtggtgtgcctggtcggcctggacgacgggctgttcccgcgtctcggtgtcgtcgac
ggggacgacgcgctggcccgccgcccgatgaccggggaacgcgacatccgttcggaggac
cggcaattgctgctcgacgcgatcggcgccgccaccgagaaactggtgatcacctacacc
ggcgccaacgaatattcggggcagccgcgcccacccgcggtgccgctggccgaattgctg
gacgccctcgacgtgacgacgccgacgaaggtgcgccaccgcatcgtgatcgagcatccg
ttgcagccgttcgacattcgcaacgtcatccccggcgaactggtgccgaaggtgccgttc
agtttcgaccccacggtgctgcgcgcggcgcgcgcggccaccggcgaacacaccgaacaa
cccaaattcgttgcggcgccgctgccgcccccgccggccgacgacgtcaacctcgccgac
ctcgtcggcttcttcaaagacccggtgaagggcttcttccgcgccctggaattcacgctg
ccctacgacgtcgacggcgtccaagatgccatgccggtcgacatcaacggcctcgaggag
tggaccgtcggcgaccggatgctgggcgacatcctgcgcgggatgagccccgatgacgcg
cggcaggccgaatggcgccgcggcacactgccccccggccagctgggctggcgcaaggtc
accgagatccgcgaccaggccgccgcgctggcgctcgaggcgctgcggcatcggcaagac
caccgatcggccgccgcctatgacgtcgacgtcgacctgggcgccggtcgccggctcacc
ggcacggtgtcgccggtctacgacgacgccctggtgtcggtgacctattcgaggctggac
ggcaagcacctgctcgaatcgtggattccgttgctggcgttggccgctcacgaccccggc
cgcgactggtcggcggtgtgcatcggccggatgcgccgcggcagaagcatccgggtcgag
gggctggggccaccggacggcgatcccgtcgaggtgctgcgcgagctggtgacgatctac
gacgcgggacggcgggaaccgattccgttgcccatcaagacgtcctacgcgtgggcggcg
gcccggcacggcggcgacgacccggcggccgaggcgcggcgccggtggaagaccagcgac
cgcttcccgggtgaggaccaggcgccggcgcacgtgcgcgcgtgggggcgcggcgcgccg
ttggacgatctgatgcagccggtgcggccgggcgaggagtgcgacggcgaggacaaccgg
ctcggcgcgtatgcggcccggctgtggctgccgatgctgcgcgccgagcggaagctcatc
tga
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