Mycobacterium intracellulare MOTT-02: OCO_44350
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Entry
OCO_44350 CDS
T01754
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mit
Mycobacterium intracellulare MOTT-02
Pathway
mit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCO_44350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mit03400
]
OCO_44350
Enzymes [BR:
mit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OCO_44350
DNA repair and recombination proteins [BR:
mit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCO_44350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFC50798
LinkDB
All DBs
Position
4661794..4665096
Genome browser
AA seq
1100 aa
AA seq
DB search
MQRFDLLGPLPAERSTTVLEASAGTGKTFALAGLVTRYLADGAASLDQMLLITFGRAASQ
ELRERVRCQIVDAVRAFADPSTVGDNQLVAYLLDGTDDQRAARRQRLRDALAGFDAATIA
TTHQFCQLVLRSLGVAGDTAASVTLLDSLDDLVTEIVDDLYLAHFGQERDDPALHYSEAL
RLAREVVNNPSTQLRPRDPDPDSRAAVCLRFANDVLAELDTRKRRLGVLGYDDLLIRLAD
ALATDGSPARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTVILIGDPKQAIYAFR
GGDIVTYLRAAQTAGERKTLDINWRSDSALVARLQVVLRGAQLGDPAIVVNDVGAHHRGH
RLAGAPRNDPFRLRVVSRKTLGRRGVQNLPIDELREHIGADLAADIRALLAAGATFDGEP
LQARDIAVIVERHRDAHACFKALCDAGVPAVYTGNTDVFTSEAAEDWLCLLEAFDQPHRP
GMVRAAAATMFFGETAQTLAAGGDALTDRIAKTLREWAGHARERGVAAIFEAAQLLGMRD
RVLGWRGGERHMTDLAHVTQLLQEVAHREHYGLPALRDWLRRQRDERGGAPERNRRLDSD
AAAVQIMTVFVSKGLQYPIVYLPFAFNRNTQDSDVVLFHDEDGTRCLHVGGRDSPDFKTV
ERLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYFEPNGGLSRLLRGRRPGDPVVPDRC
EPAKVSDDDALARLREWEAAGGPVIEDSVVAPAPSLPPAPVPRHLDSRHFHRAIDTTWRR
TSYSGLIRVAQASGVGSEPDVAGLDDEVGDIPLSSPAAGPDVPSPMADLPAGATFGSLVH
AVLETADPFAADLAAELEEHIREHSAWWPVAATPEELAAAMVPMHDTPLGPLADGLTLRR
IGLSDRLRELDFELPLAGGDRPSVGPEARLADLAPLLREHLPPDDPLVSYADRLTDRALG
DQSLRGYLTGSIDAVLRIADGAGHRFVVVDYKTNLLGDPERPLSAADYDRPRMAEAMLHS
DYPLQALLYCAVLHRFLRWRIRDYDPDRHLGGVLYLFVRGMCGADTPVRDGHPCGVFSWR
PPPSLITALSDLLDARTVPA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcttcgacctgttgggcccgttgccggccgagcgctcaaccaccgtgctggag
gccagcgcgggcaccggcaagacgttcgcgttggcgggcctggtgacgcggtatctcgcc
gacggcgcggcgagcctcgatcagatgctgctcatcacgttcggccgcgccgccagccag
gagctgcgggaacgtgtccgctgccaaatcgtcgacgcggtaagggctttcgccgacccg
tcgacggtcggcgacaaccagctggtggcgtacctgctggacggcaccgacgatcagcgc
gcggcgcgccgacagcgtctccgcgacgcgctggccggcttcgacgcggcgaccatcgcc
accacccaccagttctgccagctggtgctgcgctcgctcggcgtggccggcgacaccgcc
gcaagcgtgaccctgctcgacagcctcgacgacctggtgaccgagatcgtcgacgacctc
tacctggcgcacttcgggcaggagcgcgacgacccggcgctgcactactccgaggcgctg
cggctggcccgcgaggtggtcaacaacccgtcgacccagctgcggccgcgcgacccggac
cccgattcgcgggccgccgtctgcctccggttcgccaatgacgttctggccgagcttgat
acgcgcaagcgccggctgggcgtcctcggctacgacgacctgctgatccgactggccgac
gcgctggccaccgacggctcccccgcccggctgcggatgcaccagcgttggccgatcgtc
atggtcgacgagttccaggacaccgacccggtgcaatggcaggtcatcgaccgcgcgttc
agcgggcgctccacggtgatcctgatcggcgaccccaaacaggcgatctatgcgtttcgc
gggggcgacatcgtgacctacctgcgggcggcccagacggcgggtgagcgcaagacgctg
gacatcaactggcgcagcgattccgcgctcgtggcgcggctgcaggtggtgctgcgcggc
gcccagctcggtgaccccgcgatcgtggtgaacgatgtcggcgcgcatcaccgcggccac
cggcttgccggcgcgccccgcaacgacccgttccggttgcgcgtcgtgtcgcgaaaaacc
ctggggcgccgcggcgttcaaaacctgcccatcgacgaactgcgcgagcacatcggcgcc
gacctcgccgccgacatccgcgccctgctcgccgccggcgccacgttcgacggcgagccc
ctgcaggcccgcgacatcgcggtcatcgtggaacggcaccgggacgcgcacgcctgcttc
aaggccctgtgcgacgccggcgttcccgcggtctacaccggcaacaccgacgtgttcacc
tccgaggccgccgaggactggctgtgcctgctggaggccttcgaccaaccgcaccggccc
ggcatggtccgcgccgccgcggcgacgatgttcttcggcgagacggcccaaacgctggcg
gccggcggcgacgccctgacggaccggatcgcgaaaacgctgcgggagtgggccggtcac
gcccgggaacgcggcgtcgcggccatcttcgaggccgcccagctgctggggatgcgcgat
cgcgtgctcggctggcggggcggcgagcggcacatgaccgacctggcgcacgtcacccag
ctgctgcaggaggtcgcccaccgcgagcattacggactgccggcgctgcgcgactggttg
cgccggcaacgcgacgagcgcggcggcgcccccgaacgcaaccgccggctcgacagcgac
gccgccgccgtgcagatcatgaccgtcttcgtcagcaagggcctgcaatatccgatcgtg
tacctgccgttcgcgttcaaccgcaacacccaggacagcgacgtggtgctgttccacgac
gaggacggtacgcgttgcctgcacgtcggcggcagggacagccccgacttcaaaaccgtt
gagcggctgggccgtaaagaggatgccagcgacgacagcaggctgacctacgtcgcgttg
acccgggcgcaggcacaggtggtggcgtggtggtcaccggcgtacttcgagcccaacggc
ggcctgtcgcggctgctgcgtgggcgccggcccggcgacccggtcgttccggaccgatgc
gaacccgcgaaggtctccgacgatgacgcactggcccggttgcgcgaatgggaggccgcg
ggcgggccggtcatcgaggattcggtggtggcgcccgccccgtcgctgccgccggcgccg
gtgccccggcacctggacagccgccacttccaccgcgccatcgacaccacgtggcggcgc
acctcctattccggcctgatccgggtggcccaggccagcggggtcggcagcgagcccgac
gtcgccgggctcgacgacgaggtcggcgatatcccgttgtcctccccggccgccgggccg
gacgtgccctcgccgatggcggaccttccggcgggcgcgacgttcggctccctggtccac
gccgtgctggagacggccgacccgttcgccgcggatctggccgccgagctcgaagagcac
atccgggagcattcggcgtggtggccggtcgccgcgacccccgaggagctggccgcggcg
atggtgccgatgcacgacaccccgctgggaccgctggcggacgggttgacgctgcgccgc
atcgggctctcggatcggttgcgggaactggacttcgagcttccgctggccggcggcgat
cggccgtcggtggggccggaggcacgcctggcggacctggcgccgctgctgcgcgagcac
ctgccgcccgacgatccgctggtgtcgtatgccgaccggctgacggaccgggcgctcggt
gaccagtcgttgcgcgggtacctcaccggctcgatcgacgcggtgctccggattgccgac
ggcgcggggcaccgcttcgtggtggtggactacaagaccaacctgctcggggatcccgag
cggccgctgagcgccgccgactacgaccggccgcggatggcggaggcgatgctgcactcg
gactatccgctgcaggcgttgctgtactgcgcggtgctgcaccggttcctgcggtggcgg
atacgcgattacgacccggacaggcacctcggcggtgtgctctacctgttcgtgcgcggc
atgtgcggcgcggacaccccggtgcgcgacgggcacccgtgcggcgtcttcagttggcgg
ccaccgccgtcgttgatcacggccctgtcggacctgctcgacgcccggacggtgcccgca
tga
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