Mitsuaria sp. 7: ABE85_13505
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Entry
ABE85_13505 CDS
T04402
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
miu
Mitsuaria sp. 7
Pathway
miu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
miu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABE85_13505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miu03021
]
ABE85_13505
Transcription machinery [BR:
miu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABE85_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ANH68326
LinkDB
All DBs
Position
3088480..3090720
Genome browser
AA seq
746 aa
AA seq
DB search
MTAKKTASKAAAAETEEVKKPAVKAAAKTAKAATAVASDDDAKPKRGRKPKAETESKKPA
AKAKVEEEEEDFSDVDAEGETEGETEGEVETVEAVEVEEVGEDKPKAKPLRMKVSRAKER
ALMREFGLDETALTEEEVAKRRHELKTLIKMGKTRGFLTHQEINDHLPEKLINEEILEAI
VSMLNDMGIAVYEQAPDAATLLIQGSTSPTATEEEAEEAAEAALSTVDSEFGRTTDPVRM
YMREMGTVELLTREGEIEIAKRIEGGLQAMMLAISASPTTIAEILAIAAKIRAGEMQISE
SVDGFVSDDEADDYVAEEDFDEFDEEDDDDGAGGSKALTKKLEELKNAALVKLDSLAINF
DKMRKAFEKDGYKSANYNKAQSAISQELMTIRFTVKTIEKLCDILRSQVDDVRRFEREIR
KIVVDKCGMPQEHFIKTFPPNVLNLQWAEKEVASGKPYANIMSRNLPAVQELQQKLIDIQ
GKAVVPLDDLKGINKRMNEGEKASRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISR
QHLQEFGFEPDAPTLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNN
TAPIEAAMQAGLREVVKDILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIR
QIEAKAIRKLKHPSRSDKLRTYLDNL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaaaaagaccgcgtccaaggccgccgccgcagaaaccgaagaagtcaagaag
ccggccgtcaaggccgccgcgaagaccgccaaagccgccaccgctgtcgcgtccgacgat
gacgcgaagcccaagcgcggccgcaagcccaaggccgagaccgagtcgaagaagccggcc
gccaaggccaaggtcgaagaggaagaagaggacttcagcgacgtcgacgccgaaggcgag
accgagggcgagaccgaaggcgaagtcgagaccgtcgaggccgtcgaggtcgaggaagtg
ggcgaggacaagcccaaggccaagccgctgcgcatgaaggtcagccgcgccaaggagcgc
gcgctgatgcgcgagttcggcctggacgagacggcgctgaccgaagaggaagtcgccaag
cgccgccacgagctcaagaccctcatcaagatgggcaagacgcgcggtttcctgacgcat
caggaaatcaacgaccacttgcccgagaagctgatcaacgaggaaatcctcgaggcgatc
gtgtcgatgctcaacgacatgggcatcgccgtgtacgagcaggcgcccgacgccgccacg
ctgctgatccagggctcgacctcgccgaccgccaccgaagaggaagcggaagaagcggcc
gaggccgcgctgtcgaccgtcgactccgagttcggccgcacgaccgacccggtgcgcatg
tacatgcgcgagatgggcaccgtcgagctgctgacccgcgagggcgagatcgagatcgcc
aagcgcatcgaaggcggcctgcaggccatgatgctggccatctcggcctcccccacgacc
atcgccgagatcctggccatcgccgccaagatccgcgccggcgagatgcagatttccgaa
tcggtggacggcttcgtctccgatgacgaggcggacgactacgtcgcggaagaagacttc
gacgagttcgacgaagaggacgacgacgacggcgccggcggctccaaggccctgaccaag
aagctcgaagagctgaagaacgccgcgctggtgaagctggactcgctcgcgatcaacttc
gacaagatgcgcaaggccttcgagaaggacggctacaagtcggccaactacaacaaggcc
cagtcggcgatcagccaggagctgatgaccatccgcttcacggtcaagaccatcgagaag
ctgtgcgacatcctgcgctcgcaggtggacgacgtgcgccgcttcgaacgcgagatccgc
aagatcgtcgtggacaagtgcggcatgccgcaggaacacttcatcaagaccttcccgccc
aacgtgctgaacctgcagtgggcggagaaggaagtggcctcgggcaagccgtacgccaac
atcatgtcgcgcaacctgcccgcggtgcaggaactgcagcagaagctgatcgacatccag
ggcaaggccgtggtgccgctggacgacctcaagggcatcaacaagcggatgaacgagggc
gaaaaggcctcgcgcgacgcgaagaaggaaatgatcgaggccaacctgcgcctggtcatc
tccatcgccaagaagtacaccaaccgcggcctgcagttcctggacctgatccaggaaggc
aacatcggtctgatgaaggcggtggacaagttcgagtaccgtcgcggctacaagttctcg
acctacgcgacgtggtggatccgtcaggccatcacccgctcgatcgcggaccaggcccgc
accatccgcatcccggttcacatgatcgagacgatcaacaagatgaaccggatctcgcgt
cagcatctgcaggagttcggcttcgagccggacgcgccgacgctggccgagaagatggag
atgcccgaggacaagatccgcaagatcatgaagatcgccaaggagccgatctccatggaa
acgccgatcggggacgacgacgacagccacctgggcgacttcatcgaggacaccaacaac
accgcgccgatcgaggccgccatgcaggccggcctgcgtgaagtggtaaaggacatcctc
gacagcctgaccccgcgcgaagccaaggtgctgcgcatgcgcttcggcatcgagatgagc
acggaccacacgctggaggaagtcggcaagcagttcgacgtcacccgcgaacggatccgc
cagatcgaagccaaggcgatccgcaagctgaagcatccgtcgcgctccgacaagctgcgc
acctacctggacaacctctga
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