Mitsuaria sp. 7: ABE85_20315
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Entry
ABE85_20315 CDS
T04402
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
miu
Mitsuaria sp. 7
Pathway
miu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABE85_20315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miu03021
]
ABE85_20315
03400 DNA repair and recombination proteins [BR:
miu03400
]
ABE85_20315
Enzymes [BR:
miu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABE85_20315
Transcription machinery [BR:
miu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABE85_20315
DNA repair and recombination proteins [BR:
miu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABE85_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANH69332
UniProt:
A0A1A9HR26
LinkDB
All DBs
Position
complement(4615585..4619802)
Genome browser
AA seq
1405 aa
AA seq
DB search
MKGLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVVDPGMTPLKKFSIMSEDDYDAKRIEFGDEFIALM
GAEGIQKLLAEMDLDVEIDRLRNDMTGSELKIKKNSKRLKVMEAFKRSGIKPNWMVLEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLARLLELKAPEIIVRNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVL
LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEARV
LMLASNNVLFPASGEPSIVPSQDVVLGLYYATRERTNGKGEGMIFSDIPEMIRALENGAV
EITAKIGVRLTEYVKEGEEWVAQTKLTDTTVGRALLSEILPKGLPFSNINKALKKKEISK
LINTSFRKCGLKETVVLADKLLQAGFKLATRAGISIAIDDMLVPKQKVELIDRAEKEVKE
IEQQYVSGLVTAGERYNKVVDIWGKTGDEVGKVMMSQLSKEKILDRHGKEVEQESFNSIY
MMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGL
ADTALKTANSGYLTRRLVDVTQDLVVTETDCGTDNGINMRALVEGGEVIESLRDRILGRV
AAIDVMHPETQGVLLTAGNMLDEDILDMLEAAGVDEVKVRTPLTCGTRFGLCAKCYGRDL
GRGGMVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSDGIIGFNAT
MRYVTNGKGELVVISRSGEIVISDPHGRERERHKVPYGALLNIKADQTIKAGTILATWDP
LTRPIITEFAGQAKFENVEEGVTVAKQVDEVTGLSTLVVIDPKRRGAAKVIRPQVKLLDA
NGQEVKIPGTDHSVTIGFQVGSLVQIRDGQELAPGEVLARIPVEGQKTRDITGGLPRVAE
LFEARSPKDAGFLAEQTGTVSFGKETKGKVRLEITDPEGRKHELLVPKEKNILVHEGQVV
NRGELVVDGPADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRV
QIVNPGDSAYIAGEQVERSELLDTNDRLRGEGKLTVTHADVLLGITKASLSTDSFISAAS
FQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAFHQARRAKEEMDDAERRSIA
IQEAEEMAAVQLSALDAASDAGANE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtttgttggacctgttcaagcaattcacgccggacgagcatttcgacgcgatc
aagatcgggctggcctcgcccgagaagatccgctcgtggtcgttcggtgaagtgaagaag
cccgagaccatcaactaccggacgttcaagccggaacgtgatggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtcacccagaccaaggtgcgccgtgag
cgcatgggccacatcgagctggccgctccttgcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcgtacgtcgtggtggatccgggcatgaccccgctgaagaagttcagcatcatg
tccgaggacgactacgacgcgaagcgcatcgagttcggtgacgagttcatcgcgctgatg
ggcgccgaaggcatccagaagctgctggcggaaatggatctcgacgtcgagatcgaccgc
ctgcgcaacgacatgaccggctccgagctgaagatcaagaagaactccaagcgcctcaag
gtgatggaagccttcaagcgctcgggcatcaagccgaactggatggtgctggaagtgctg
ccggtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgcttcgccacg
tcggacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctggcccgtctg
ctcgagctgaaggctcctgagatcatcgtgcgcaacgaaaagcgcatgctgcaggaagcc
gtcgactcgctgctggacaacggccgccgcggcaaggcgatgaccggcgcgaacaagcgt
gccctcaagtcgctggccgacatgatcaagggcaagagcggtcgtttccgtcagaacttg
ctgggcaagcgcgtcgactactcgggtcgttcggtcattaccgtcggtccgacgctcaag
ctgcatcagtgcggcctgccgaagctgatggcgctggagctgttcaagcctttcatcttc
tcgcgcctggaagcgatgggcatcgcgaccacgatcaaggccgcgaagaaggaagtcgag
agcggcaccccggtcgtctgggacatcctggaagaggtcatcaaggagcacccggtcctg
ctgaaccgcgcgccgacgctgcaccgtctgggcatccaggcgttcgagccggtgctgatc
gaaggcaaggcgatccagctgcatccgctggtctgcgcggcgttcaacgccgacttcgac
ggtgaccagatggccgtccacgtgccgctgtcgatcgaagcgcagatggaagcccgcgtg
ctgatgctggcttcgaacaacgtgctgttcccggcgtcgggcgagccgtcgatcgtgccg
tcgcaagacgtggtgctgggtctgtattacgcgacccgcgaacgcacgaacggcaagggc
gagggcatgatcttctcggacatccccgagatgatccgcgcgctggaaaacggcgcggtg
gaaatcaccgccaagatcggcgtgcgcctgaccgagtacgtcaaggaaggcgaggaatgg
gttgcccagaccaagctgaccgacacgaccgtcggccgtgcgctgctgtccgagatcctg
cccaagggccttcccttctccaacatcaacaaggcgttgaagaagaaggaaatctcgaag
ctgatcaatacgtccttccgcaagtgcggcctgaaggaaaccgtggtgctggcagacaag
ctgctgcaggccggtttcaagctggccacgcgcgcaggcatctcgatcgccatcgatgac
atgctcgtgccgaagcagaaggtcgagctgatcgaccgcgccgagaaggaagtcaaggag
atcgagcagcagtacgtctcgggtctcgtgaccgccggcgagcgctacaacaaggtcgtc
gacatctggggcaagaccggcgacgaagtcggcaaggtcatgatgtcgcagctgtccaag
gaaaagatcctggaccgccacggcaaggaagtcgagcaggagtcgttcaactcgatctac
atgatggccgactcgggtgcgcggggttccgcggcgcagatccgtcagctggccggcatg
cgcggcctgatggcgaagccggacggctcgatcatcgagacgccgatcacggcgaacttc
cgcgaaggcctgaacgttctgcagtacttcatctccacccacggtgctcgtaagggcctg
gcggacacggcgctgaagaccgcgaactcgggttacctgacccgtcgtctggtcgacgtg
acgcaggatctggtcgtgaccgagaccgattgcggcacggacaacggcatcaacatgcgc
gccctggtcgaaggcggtgaggtgatcgagtccctgcgtgaccgcatcctcggtcgcgtg
gccgcgatcgacgtcatgcatccggaaacgcaaggcgtcctgttgaccgccggcaacatg
ctggatgaggacatcctggacatgctggaagctgccggcgtggacgaggtcaaggtccgc
accccgctgacctgcggtacccgtttcggcctgtgcgcgaagtgctatggccgcgacctg
ggtcgtggcggcatggtgaacaccggcgaagcggtcggcgtcatcgccgcccagtcgatc
ggcgaacccggcacccagctgacgatgcggactttccacatcggcggtgcggcgtcgcgt
gcagcggtggcttcgagcgtggaagcgaagtcggacggcatcatcggcttcaacgccacg
atgcgctacgtcacgaacggcaagggcgagctggtggtgatttcgcgttccggcgaaatc
gtcatctcggacccgcacggccgtgagcgcgagcgtcacaaggtgccttacggcgccctg
ctgaacatcaaggctgaccagaccatcaaggccggcaccatcctggcgacctgggacccg
ctgacccgcccgatcatcacggaattcgccggtcaggcgaagttcgagaacgtcgaggaa
ggcgtcaccgtggccaagcaggtcgacgaagtgacgggcctgtccacgctggtcgtgatc
gacccgaagcgccgtggcgctgccaaggtcatccgcccgcaggtcaagctgctggacgcc
aacggccaggaagtgaagatccccggcaccgatcactcggtgacgatcggcttccaggtc
ggctcgctggtccagatccgcgacggtcaggaactggctcctggtgaagtgctggcgcgt
atcccggtggaaggtcagaagacccgtgacattaccggcggtctgccgcgtgtcgccgag
ctcttcgaagcccgttcgccgaaggacgccggcttcctggcggaacagaccggcacggtc
tcgttcggcaaggagaccaagggcaaggtccgcctcgagatcaccgatccggaaggtcgc
aagcacgagctgctggtgcccaaggaaaagaacatcctggtgcacgaaggccaggtggtg
aaccgcggcgaactggtggtcgacggtccggccgatccgcaggacatcctgcgtctgctg
ggcatcgaggagctggcgcgctacatcgtcgacgaagtgcaggacgtgtaccgtctgcag
ggtgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgtcgcgtg
cagatcgtcaacccgggcgactcggcctacatcgccggcgagcaggtcgagcgttcggaa
ctgctggacaccaacgaccgcctgcgcggcgaaggcaagctgacggtcacgcatgccgac
gtgctgctgggtatcacgaaggcctcgctgtcgacggactcgttcatctccgcggcgtcg
ttccaggaaacgacacgcgtgctgaccgaagccgcgatcatgggcaagcgcgacgaactc
cgtggtctgaaggagaacgtcatcgtgggtcgtctgattcctgccggcaccggcatggcc
ttccaccaggcgcgtcgcgccaaggaagaaatggacgacgccgagcgccgttccatcgcc
atccaggaagccgaggaaatggcagcggtgcaactgtccgcgctcgacgcggccagcgac
gccggcgccaacgagtaa
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