Mitsuaria sp. 7: ABE85_20320
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Entry
ABE85_20320 CDS
T04402
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
miu
Mitsuaria sp. 7
Pathway
miu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABE85_20320 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miu03021
]
ABE85_20320 (rpoB)
03400 DNA repair and recombination proteins [BR:
miu03400
]
ABE85_20320 (rpoB)
Enzymes [BR:
miu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABE85_20320 (rpoB)
Transcription machinery [BR:
miu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABE85_20320 (rpoB)
DNA repair and recombination proteins [BR:
miu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABE85_20320 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ANH69333
UniProt:
A0A1A9HNS6
LinkDB
All DBs
Position
complement(4619821..4623942)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAQATPYSYTERKRIRKSFGKRVSVLNVPYLLTMQKESYVDFLQKDVAPLKRKPEGLQAA
FLSTFPITSHNGFVEMKFLEFNIAKPPFDVRECQQRGLTFAAAVRAKLQMIIYDRESPQP
KTVKEIKEQEVYMGEVPLMTDYGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLL
FSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLNPEQILAHFFVFDNFR
LMDSGAQMEFVAERLKGEVARFDITDKSGNVLVEKDKRITARHVRQLEQSGTQHVTVPED
FLLGRVLAKNMVDPDTGEIIAKANDELTDSLLKKLRVAGVKDIQALFTNELDEGAYISQT
LASDETADQLAARVAIYRMMRPGEPPTEDAVEALFNRLFYSEDTYDLSRVGRMKFNARVG
RDIPTGAMTLSNEDILDVVKILVELRNGRGEVDDIDHLGNRRVRCVGELAENQYRSGLAR
IEKAVKERLGQAETEALMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLSEITHKRRV
SALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETP
YRRVVDSKVTNQIDYLSAIEEGKYVIAQANASLNEGGQLVDELVSARENGESVLTSPERI
QYMDVAPTQIVSVAASLVPFLEHDDANRALMGANMQRQAVPTLRPEKAFVGTGVERVAAK
DSGTVVAARRGGVVDYVDTNRIVIRVNDDETVAGEVGVDIYNLIKYQRSNQNTNIHQRPI
VKRGDKVGAEDIIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTS
IHIEELVVMARDTKLGSEEITRDIPNLSEQQLARLDESGIVYIGAEVNPGDVLVGKVTPK
GETTLTPEEKLLRAIFGEKASDVKDTSLRVDQGTNGTVIDVQVFTREGIQRDKRAQQIID
DELKRFRLDLNDQLRIVEADAFDRVEKLLVNKVANGGPKKITKGTVISKDYLAEVEKFHW
FDVRPAEDDIANQLESIKNSLEQTRHSFDLAYDEKRKKLTQGDELPAGVLKMVKVYLAVK
RRLQPGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQVLEVHL
GWAGKGIGQRIGDMLQREARVAELRDFMDQLFNQNGGKSEELAQLSDDEILGMAQNLQHG
ATFATPVFDGAKESEIRAMLKLAYPDDIAAKKGLTPTRTQAFLYDGRTGEQFERPTTIGY
MHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYILQE
MLTVKSDDVNGRTKVYESIVKGEHSIEAGMPESFNVLVKEIRSLGIDIELERN
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcaaccccctacagctacaccgagcgcaagcgaatccgcaagagcttcggc
aagcgcgtgagcgtgctcaacgttccgtacctgctgacgatgcagaaggagtcgtatgtc
gacttcctgcaaaaggatgtcgctcccctgaagcgcaaaccggaaggcctgcaagcggcg
ttcctctccacgttcccgatcacgtcgcacaacgggttcgtggaaatgaagttcctcgaa
ttcaacatcgccaagccgccgttcgacgtccgcgaatgccagcagcgtggtctgaccttc
gccgccgccgtgcgtgcgaagctgcagatgatcatctacgaccgggaaagcccgcagccg
aagacggtcaaggaaatcaaggagcaagaggtctacatgggcgaagttccgctcatgacc
gactacggctcgttcatcatcaacggcaccgagcgcgtcatcgtctcgcagctgcaccgc
tcgcccggcgtgttcttcgaacacgacaagggcaagacccactcgtccggcaagctgctg
ttctcggcccgcatcattccgtatcgcggctcgtggctggacttcgagttcgacccgaag
gacatcctgtacttccgcgtcgaccgccgccgcaagatgccggtcacgatcctgctcaag
gccatcggcctgaatcccgagcagatcctggcgcacttcttcgtcttcgacaatttccgc
ctgatggactcgggcgcccagatggagttcgtggccgaacgcctgaagggtgaagtggcg
cgcttcgacatcaccgacaagagcggcaacgtgctggtcgagaaggacaagcgcatcacc
gcccgtcacgtgcgtcagctggagcagtccggcacgcagcatgtgaccgtgccggaagac
ttcctgctcggacgtgtgctggccaagaacatggtcgacccggacaccggcgagatcatc
gcgaaggccaacgatgagctgaccgactcgctgctgaagaagctgcgcgtcgcaggcgtc
aaggacatccaggcgctgttcaccaacgaactggacgaaggcgcgtacatcagccagacg
ctggcgtcggacgagactgccgatcagttggccgcgcgcgtggccatctatcgcatgatg
cgtcccggcgagccgccgacggaagatgcggtcgaagcgctgttcaaccgcctgttctac
agcgaagacacgtacgacctgtcgcgcgtcggccggatgaagttcaacgcccgcgtgggc
cgcgacatcccgaccggtgcgatgacgctgtcgaacgaggacatcctcgacgtcgtcaag
atcctggtcgagctgcgcaatggccgcggcgaagtcgatgacatcgaccatctgggcaac
cgtcgcgtccgttgcgtcggcgaactggccgagaaccagtaccgctcgggtctggcccgt
atcgagaaggccgtcaaggaacgtctgggccaggccgagaccgaagccctgatgccgcac
gacctgatcaactccaagccgatctccgcggcgctgaaggagttcttcggtgcgtcgcag
ctgtcgcagttcatggaccagaccaacccgctgtccgagatcacgcacaagcgtcgtgtc
tcggccctgggcccgggcggtctgacccgcgagcgcgccggcttcgaagtccgtgacgtg
cacccgacccactatggccgcgtctgcccgatcgaaacgccggaaggcccgaacatcggc
ctgatcaactcgctggcgctgtatgcgcgcctgaacgagtacggcttcctggagaccccg
taccgccgcgtggtggactcgaaggtcaccaaccagatcgactacctgtcggccatcgaa
gaaggcaagtacgtgatcgcccaggcgaacgcgtcgctgaacgaaggcggtcaactggtc
gacgagctggtctccgcgcgtgagaacggcgaatcggtgctgacctcgccggaacgcatc
cagtacatggacgtggcgccgacgcagatcgtgtcggtcgcggcttcgctggtgccgttc
ctggagcacgacgacgcgaaccgcgcgttgatgggcgccaacatgcagcgtcaggccgtt
ccgaccctacgtcctgaaaaggcgttcgtgggcacgggcgtcgagcgcgtggccgcgaag
gactcggggacggtggtcgcggctcgccgcggcggcgtggtcgactacgtggacacgaac
cgtatcgtgatccgtgtgaacgacgacgaaaccgtggccggtgaagtcggtgtcgacatc
tacaacctgatcaagtatcagcgtagcaaccagaacaccaacatccaccagcgtccgatc
gtcaagcgtggcgacaaggtcggcgcggaagacatcattgccgacggcgcgtcgaccgat
ctgggtgagttggccctgggccagaacatgctggtcgcgttcatgccgtggaacggctac
aacttcgaagactcgatcctgatctccgaacgcgtggtggccgaagaccgctatacctcg
atccacatcgaggaactggtggtcatggcgcgtgacacgaagctcggcagcgaggaaatc
acccgcgacatcccgaacctgagcgagcagcaactggctcgtctggacgaatccggcatc
gtgtacatcggtgccgaggtgaacccgggcgacgtgctggtgggcaaggtcacgccgaag
ggcgagaccacgctgacgccggaagagaagctgctgcgagcgatcttcggtgagaaggcg
tcggacgtgaaggacacgtcgctgcgcgtggaccagggtaccaacggcacggtcatcgac
gtgcaggtgttcacccgcgaaggcatccagcgcgacaagcgcgcccagcagatcatcgac
gacgagctgaagcgtttccgcctggacctgaacgaccagctgcgcatcgtggaagccgac
gcgttcgaccgcgtcgagaagctcctggtgaacaaggtcgccaatggcggtccgaagaag
atcaccaagggcacggtcatctcgaaggactatctggccgaggtcgagaagttccactgg
ttcgacgtccgtcccgccgaggacgacatcgccaaccagctggagtcgatcaagaactcg
ctcgagcagacccgtcacagcttcgacctggcttatgacgagaagcgcaagaagctgacg
cagggcgacgagctgccggccggcgtgctgaagatggtcaaggtgtacctggccgtcaag
cgtcgtctgcagcctggcgacaagatggccggccgtcacggcaacaagggcgtcgtgtcc
aagatcaccccgatcgaagacatgccctacatggccgacggcacgcctgccgacatcgtg
ctgaacccgctgggcgtcccgtcgcggatgaacgtgggccaggtgctcgaagtccatctg
ggctgggctggcaagggcatcggtcaacgcatcggcgacatgctgcaacgcgaagcccgt
gtggccgagctgcgcgacttcatggaccagctgttcaaccagaacggcggcaagtccgag
gagctggcgcaactgagcgatgacgagatcctcggcatggcgcagaacctgcagcacggc
gcgactttcgcgacccccgtcttcgacggcgcgaaggaaagcgagatccgcgcgatgctg
aagctggcctatccggacgacatcgccgcgaagaagggcctcacgcctacccgcacgcag
gccttcctgtatgacggccgcaccggcgagcagttcgagcgtcccacgacgatcggctac
atgcacgtgctgaagctgcatcacctggtcgacgacaagatgcatgcccgctccaccggc
ccgtactcgctggtcacgcagcagccgctgggcggcaaggcgcagttcggcggacagcgt
ttcggcgagatggaagtgtgggcgctggaagcctacggcgcttcgtacatcctgcaggaa
atgctgacggtgaagtccgacgacgtgaacggccgtacgaaggtgtacgagtccatcgtc
aagggcgagcactcgatcgaagccggcatgcccgagtcgttcaatgtgctggtgaaggaa
atccgttcgctgggcatcgacatcgagctcgagcgcaactaa
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integrated database retrieval system
