Mitsuaria sp. 7: ABE85_26465
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Entry
ABE85_26465 CDS
T04402
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
miu
Mitsuaria sp. 7
Pathway
miu03410
Base excision repair
miu03430
Mismatch repair
miu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABE85_26465
03430 Mismatch repair
ABE85_26465
03440 Homologous recombination
ABE85_26465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miu03400
]
ABE85_26465
DNA repair and recombination proteins [BR:
miu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABE85_26465
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABE85_26465
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABE85_26465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANH71048
UniProt:
A0A1A9HVF3
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Position
unnamed:complement(209439..211196)
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AA seq
585 aa
AA seq
DB search
MSSPRILTRDVPPDSAHALQEAGFSPLLSRLFAARGVLSRDELDPDLKHLLPPEGPLGML
GIDKAAVLLADAITAGDRICIVADYDCDGATACAVMLRGLALLGAQPGTVSYVVPDRAVH
GYGLTPTIVELAMKHEPKLLVTVDNGIASHAGVAFARALGLKVLVTDHHLPAVTADGQPT
VPDADALVNPNQPGCPFPGKSLAGVGVAFYVLTVLRGELRRRGAFGAPGDGVPPRLDGLL
DLVALGTVADVVRLDANNRRLVAQGLRRMRAGRMQPGVQALFTAASRDSSRANSFDLGFA
LGPRINAAGRLDDMTLGITCLTTDDSEQALALARELDRINRERREIEAGMQEQALALLER
LMTDPRLNGAPPPALALFDADFHEGVVGIVASRIKDRLHRPVFVFAEGADGQLKGSGRSI
PGFHLRDALDLVSKRHPELLKKFGGHAMAAGCTLGPGGVDAFRTAFEDVAREWLDEASLT
RTLRTDGPLPPEAFCAETVQELEAQVWGQAFEAPLFCDRVQVVNQRIVGERHLKLRLRQG
AWIRDAIWFGHTEQLPEQVTLAYRLSLDEFQGQQRVQMVVEAMAE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtccccgcatcctgacccgcgacgtcccgccggactccgcccacgcgctgcag
gaggcgggcttctcgccgctgctgtcgcggctcttcgcggcgcggggcgtgctgtcgcgc
gacgagctagatccggacctgaagcacctgctcccgcccgaaggcccgctggggatgctc
ggcatcgacaaggctgcggtgctgctggccgacgcgatcaccgcgggcgatcgcatctgc
atcgtggcggactacgactgcgacggcgccaccgcctgcgcggtgatgctgcgcggcctg
gcgctgctcggcgcgcagccgggcacggtcagctacgtcgtgcccgaccgcgcggtgcac
ggctacggcctgacgccgacgatcgtcgagctggcgatgaagcatgagccgaagctgctc
gtgaccgtggacaacggcatcgccagccatgccggcgtggccttcgcgcgcgcactcgga
ctgaaggtcctcgtcaccgaccatcaccttcccgcggtcaccgccgacggtcagccgacg
gtgcccgacgccgatgcgctggtgaatcccaaccagcccggctgccccttccccggcaag
agcctggccggtgtcggcgtcgcgttctacgtgctgacggtgctgcgcggggaactgcgc
cgccgcggcgccttcggcgccccgggtgatggcgtgccgccgcgcctcgacggcctgctc
gacctcgtcgcgctgggcaccgtcgccgacgtggtgcggctcgacgccaacaaccgtcgc
ctggtggcgcaaggcctgcgccggatgcgcgccggccgcatgcagccgggcgtgcaggcg
ctcttcaccgcggcgagccgcgactcgtcgcgcgccaacagtttcgacctcggcttcgcg
ctcggtccgcgcatcaacgccgccggccgcctggacgacatgacgctgggcatcacctgc
ctgacgacggacgacagcgagcaggcgctggccctggcgcgcgagctcgaccgcatcaac
cgcgagcgtcgcgagatcgaagccggcatgcaggagcaggcgctcgcgctgctcgaacgc
ctgatgacggacccgcgcctgaacggcgcgccgccgcccgcgctcgcgctgttcgacgcc
gatttccacgaaggcgtcgtcggcatcgtggcctcgcggatcaaggaccggctgcaccgc
ccggtcttcgtcttcgccgagggcgcggacgggcagctcaagggctcgggccgctcgatc
cccggcttccacctgcgcgatgcgctggacctggtctccaagcgccatccggaactcctg
aagaaattcggcggccacgcgatggcggcgggatgcacgctggggccgggcggcgtcgac
gccttccgcaccgccttcgaggacgtcgcgcgggaatggctggacgaggcctcgctcacc
cgcacgctgcgcaccgacggccccttgccgccggaagccttctgcgccgaaacggtccag
gagctggaagcccaggtctggggccaggccttcgaggcgccgctgttctgcgaccgtgtg
caggtcgtgaaccagcgcatcgtcggcgagcgccacctgaagctgcgcctgcgccagggt
gcctggatccgcgacgccatctggttcggccacaccgagcagttgcctgagcaggtcacg
ctggcctaccgcctgagcctggatgaattccaggggcagcagcgcgtgcagatggtcgtg
gaggcgatggccgaatag
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