Mitsuaria sp. 7: ABE85_26580
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Entry
ABE85_26580 CDS
T04402
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
miu
Mitsuaria sp. 7
Pathway
miu03420
Nucleotide excision repair
miu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
miu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABE85_26580
03430 Mismatch repair
ABE85_26580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miu03400
]
ABE85_26580
Enzymes [BR:
miu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE85_26580
DNA repair and recombination proteins [BR:
miu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABE85_26580
MMR (mismatch excision repair)
Other MMR factors
ABE85_26580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANH71119
LinkDB
All DBs
Position
unnamed:235478..237859
Genome browser
AA seq
793 aa
AA seq
DB search
MFTPRAPRGLLDNLNPEQYAAVTLGQEPALILAGAGSGKTRVLTTRIAWLMSQGHATPAS
VLAVTFTNKAAKEMVTRLSAMLPVNVRGMWIGTFHGLCNRFLRAHWKLAGLPQGFQILDS
GDTVSAVKRVIKAMKLDEERFVPKQVSWYIAGAKEDGMRPKDIDLRDEQTRKLVEIYQAY
QDQCEREGVVDFAELMLRSFELMRDNQAVREHYQRRFQYVLVDEFQDTNKLQYAWLKMFA
PPGRGQGVFAVGDDDQSIYAFRGARVGNMADFEREYRVRQVVKLEQNYRSFGNILDAANA
LISNNSHRLGKNLRTEAGPGEPVRVHEASSDFAEAQWLLEEAQALHRQGLERKEIAVLYR
SNAQSRVIESALFNAGIPYRVYGGLRFFERAEVKHALAYLRLIENPNDDTSFLRVVNFPA
RGIGARTVEQLQDAARPSGRSLVQSIGAVGGRGGASLAGFVGLVDAMREATAGLTLREII
EHIIEHSGLTAFYRAEKEGEDRLENLGELVNAAEAFVTQEGFGKDAVALPVDEHSPGAIA
DGLPAAVAPAAPATPDAETGEIMSPLAAFLTHASLEAGDNQAQAGQDAIQLMTVHSAKGL
EFDAVFITGMEEGLFPHENSLSDSDGLEEERRLMYVAITRARQRLYISFCQTRMLHGQTR
YNIKSRFMEELPEETLKWLTPRNQGFGSGFAKDYQQAWQRGSGLKSMVGAGRVDAAGFPQ
APVPKAMKQSAAEKTGNEHGGLRVGKGVFHNKFGEGVLLTLEGNGPDARAQVNFGRHGTK
WLALSVAKLTPID
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
ctgttcacgccgcgcgcgccgcgcggcctgctggacaacctcaaccccgagcagtacgcc
gcggtgacgctgggccaggagcccgcgctgatcctcgccggcgccggctcgggcaagacc
cgcgtgctgaccacccgcatcgcctggctgatgagccagggccatgcgaccccggcctcg
gtgctggcggtgaccttcaccaacaaggccgccaaggagatggtcacgcgcctgtccgcg
atgctgccggtgaacgtgcgcggcatgtggatcggcaccttccacggcctgtgcaaccgc
ttcctgcgcgcgcactggaaactggccggcttgccgcaaggtttccagatcctggactcg
ggcgacacggtctccgcggtcaagcgcgtcatcaaggcgatgaagctcgacgaggagcgc
ttcgtccccaagcaggtctcctggtacatcgccggcgcgaaagaggacggcatgcgtccc
aaggacatcgacctgcgcgacgagcagacccgcaagctggtcgagatctaccaggcctac
caggaccagtgcgagcgcgaaggcgtggtcgacttcgccgagctgatgctgcgctcgttc
gagttgatgcgcgacaaccaggcggtgcgcgagcattaccagcgccgcttccagtacgtg
ctggtcgacgagttccaggacaccaacaagctgcagtacgcgtggctgaagatgttcgcg
ccgccggggcgcgggcagggcgtgttcgcggtgggcgacgacgaccagagcatctacgcc
ttccgcggcgcgcgcgtgggcaacatggccgacttcgagcgcgagtaccgcgtgcgccag
gtcgtgaagctggagcagaactaccgcagcttcggcaacatcctggacgcggccaacgcg
ctgatcagcaacaacagccaccgcctgggcaagaacctgcgcaccgaggcgggtccaggc
gagcccgttcgcgtgcacgaggcgagcagcgatttcgccgaggcgcaatggttgctggag
gaggcgcaagccctccatcgccagggcctggaacgcaaggagatcgcggtgctctaccgg
agcaacgcgcagtcgcgggtgatcgagtcggcgctgttcaacgccggcatcccgtaccgc
gtgtacggcggcctgcgcttcttcgaacgcgccgaggtgaagcacgcgctggcctacctg
cgcctgatcgagaaccccaacgacgacaccagcttcctgcgcgtcgtcaacttcccggcg
cgcggcatcggcgcgcggaccgtcgagcagctgcaggacgcggcgcgtccgagcggacgc
tcgctggtgcagagcataggcgcggtcggcggtcgcggcggcgcgagcctggcgggcttc
gtcggtctggtcgacgcgatgcgcgaggccacggccggcctcacgctgcgcgagatcatc
gagcacatcatcgagcactcgggcctgaccgcgttctaccgcgcggagaaggaaggcgag
gaccggctggagaacctgggcgaactggtcaacgccgccgaggccttcgtgacgcaggag
ggcttcggcaaggacgcggtggcgctgccggtggacgagcactcgcccggcgcgatcgcg
gacggactgcccgcggcggtcgctccggcggcgcccgcgacgccggacgcggagaccggc
gagatcatgtcgccgctggcggccttcctgacgcatgcctcgctggaggccggcgacaac
caggcgcaggccggccaggacgcgatccagttgatgacggtgcactcggccaagggcctg
gagttcgacgcggtgttcatcaccggcatggaagagggcctgttcccgcatgagaactcg
ctgtccgactcggacgggctggaggaagagcgccggctgatgtacgtcgcgatcacgcgc
gcgcgccagcggctgtacatcagcttctgccagacgcggatgctgcacggccagacccgc
tacaacatcaagagccgcttcatggaggagctccccgaggagaccttgaagtggctgacg
ccgcgcaaccagggcttcggctcgggcttcgcgaaggactaccagcaggcctggcagcgc
ggctcggggttgaagtcgatggtgggcgcgggccgtgtcgatgcggccggtttccctcag
gccccggtgcccaaggcgatgaagcaatcggcggccgagaagaccggcaacgaacatggt
ggactgcgcgtcggcaagggcgtgttccacaacaagttcggcgaaggcgtgctgctcacg
ctcgaaggcaatgggccggacgcgcgggcgcaggtgaacttcggccggcacggcacgaag
tggctggcgctcagcgtggccaagctgaccccgatcgactga
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