Microvirga sp. 17 mud 1-3: C4E04_02130
Help
Entry
C4E04_02130 CDS
T05470
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4E04_02130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_02130
Enzymes [BR:
miv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4E04_02130
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4E04_02130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
ABCA11_C
AAA_19
zf_Rg
nSTAND_NTPase5
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AWM85660
LinkDB
All DBs
Position
462873..465035
Genome browser
AA seq
720 aa
AA seq
DB search
MTNQVADVLIPLALDTAYSYAVPDGLTLQEGDVVQVPLGTREVAGVVWSLRPGSGANFKA
VTGRIEAPSLSPNMRKFLDWVAWYTLAPKGSALAMGLKLVDGERPEAVRVGVRLVGTLPK
RMTPARQRVVDVARDGLVRLKRDLAQEAGVSAGVLDGLIDEGTLETVTLLAEPAADIPDP
DFRHNDLSEDQRAAADTLVATLAEDHAPVTLLEGVTGSGKTEVYFEAVAEAIRQGRQALI
LMPEIALTAQFLDRFAARFSVKPATWHSGVTGRKRERLYAGIASGDVKVVAGARSALFLP
YAALGLIVVDEEHETAYKQEDGVHYHARDMAVVRGRIENAAVVLASATPSIESRVNVERG
RYRHVQLPERFGGRQLPHIRAVDLRREQVPKGRWLSPALVAAMEENLGRGEQVLLFLNRR
GYAPLTLCRACAHRYECPNCSAWLVEHRFRRALVCHHCGHVERTPQACIACGSIDSLVSC
GPGVERIAEEVAELFPDRRGIVLSSDFPGGTERLRRELAAIAAGEFDIVIGTQLVAKGHN
FPLMTLVGVLDADIGLTSGDPRAAERTFQLLQQVTGRAGRGEKPGRALVQTWQPDHPVIA
ALVSGDAERFYREETRVRELAGLPPFGRLASLIVSAAEREAAEAHARAMARIAEPPPGVA
VLGPAEAPLALIRGRYRFRLLVKTEREVDLQGYLRAWMARCPKAKGNTRVTIDVDPQSFL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccaggtcgccgatgtcctcattccgctcgcgctggacacggcctacagctac
gcggtgcccgatgggctgaccctccaggagggggacgtggtgcaggtgcccctcggcacc
cgcgaggtggcgggtgttgtctggagcctccggcccggctcgggtgccaatttcaaggcc
gtgacggggcgaatcgaggcgccgtccctgtcgccgaacatgcgcaaattcctcgattgg
gtcgcctggtacaccctcgcgcccaagggctccgccctcgccatggggctcaagctcgtg
gacggggagcggccagaggcggtccgggtcggcgtgcgccttgtcgggacgctcccgaaa
cggatgacgcctgcccggcagagggtcgtggatgtggcccgggacggcctcgtgcgcctg
aagcgggacctcgcccaggaggccggcgtcagcgccggggtcctcgacggcctgatcgac
gagggcaccctggagaccgtgaccctgctggctgagcctgcggccgacatcccggatccg
gatttccgccataacgatctctcggaggaccagcgcgccgccgccgacactctggtggcg
accctggccgaggaccatgcgcccgtgaccctcctcgagggcgtcactggctccggcaag
acagaggtttacttcgaggccgtggccgaggcgatccggcaggggcggcaggcactgatc
ctgatgcccgagatcgccctcacggcccagttcctcgaccggttcgcggcccgattcagc
gtcaagcccgccacgtggcattcgggcgtgacgggccgcaagcgcgagaggctctatgcg
ggcatcgcgtccggggacgtgaaggtggtggcgggcgcccgctcggccctgttcctgccc
tatgccgcgctcggcctcatcgtggtcgatgaggagcacgagaccgcctacaagcaggag
gacggggtccattaccacgcccgggacatggcggtggtgcgcgggcggatcgagaacgcc
gccgtcgtcctggcctccgcaactccctccatcgagagccgggtgaacgtggagcgcggc
cgttaccgccatgtgcagctgcccgagcgcttcggcgggcggcagctgccccatatccgg
gccgtcgatctgcggcgggagcaggtgcccaaggggcgctggttgtcgccggccctggtc
gcagccatggaggaaaatctgggccggggcgagcaggtgctcctgttcctcaaccgccgg
ggctacgcgccgctcaccctctgccgggcctgcgcccaccgctacgaatgccccaattgc
tccgcctggctggtggagcaccgcttccggcgggccctcgtctgccaccattgcggccat
gtggagcgcacgccccaggcctgcatcgcctgcggcagcatcgattccctggtctcctgc
ggaccgggcgtggagcggatcgccgaggaggtggcggagctgttcccggaccggcgcggc
atcgtgctctccagcgattttccgggcgggaccgagcgcctgcgccgggagctcgcggcc
atcgcggcgggcgagttcgacatcgtgatcgggacccagctggtcgccaaggggcacaac
ttcccgctcatgaccctggtcggcgtgctcgatgcggatatcggcctgacctccggcgac
ccccgggcggcggagcgcaccttccagctcctccagcaggtcacgggccgtgcgggacgc
ggcgagaagccgggccgggccctggtccagacctggcagccggaccacccggtcatcgcg
gccctggtctcgggcgatgccgagcgattctaccgggaggagacccgggtgcgcgagttg
gcgggcctgccgcccttcgggcgcctggcctccctcatcgtgtcggcggccgagcgcgag
gccgcagaggcccatgcccgggccatggcccgaatcgccgagccgccgcccggagtcgcg
gttctggggcccgcagaggcgcccctcgcgctgatccgaggccgctaccgcttccgcctc
ctggtgaagaccgagcgggaggtggacctccagggctacctgcgcgcctggatggcgcgc
tgccccaaggccaaaggcaatacccgcgtcaccatcgacgtggacccccagagctttttg
tga
DBGET
integrated database retrieval system
