Microvirga sp. 17 mud 1-3: C4E04_02970
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Entry
C4E04_02970 CDS
T05470
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miv03032
]
C4E04_02970
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_02970
Enzymes [BR:
miv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C4E04_02970
DNA replication proteins [BR:
miv03032
]
Prokaryotic type
DNA Topoisomerases
C4E04_02970
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C4E04_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWM85804
UniProt:
A0A2Z3I1L6
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All DBs
Position
646207..647409
Genome browser
AA seq
400 aa
AA seq
DB search
MSLDPSLDSKPSTDDIVDPRDAAETAGLLYVSDEEPGIRRRKAGKGFSYKGPDGRKVTDK
ATLERIRSLAIPPAYTDVWICAKSNGHIQATGRDARGRKQYRYHPAFREIRDSTKYEHML
DFAKALPNIRNTIDTHMSLRGLPREKVLATVVHLLEDTLIRVGNSDYARQNKSYGLTTLR
DPHVKVEGGELRFQFKGKSGKTWNLKVRDRRIARIVKACQDLPGQHLFQYLDETGTQQSV
TSADVNAYLREITGRDITAKDFRTWAGTVLAALALSEFEEFDSEAMAKKNIRSAIETVAA
RLGNTPAICRKCYVHPEVFSTYLDGGLLLEIREEVEAELRENLPALKPEEAAVLSLLQAR
LSAEAASSKAKSNSKAVSNSKAPKTKRSPRKTSHGAEARA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgacccgtccctcgactcgaagccctccaccgacgacatcgtcgatccgcgc
gatgcggccgaaacggctggcctcctctacgtgtccgacgaagagcccggcatccggcgg
cgcaaggccgggaaaggcttttcctataaggggccagacggccgcaaggtgaccgacaag
gcgaccctggagcgcatccggtccctcgcgattcccccggcctatacggatgtgtggatc
tgcgccaaatccaacggtcatatccaggcgacggggcgcgatgcgcgtgggcgcaagcag
taccgctaccatcccgctttccgggagatccgcgacagcacgaaatacgagcacatgctc
gatttcgcgaaggccctgccgaatatccgcaacaccatcgacacccatatgtccttacgg
gggttgccgcgcgagaaggtgctcgccaccgtggtgcatctcctcgaagacacgctcatc
cgggtcggcaattccgactatgcgcggcagaacaagagctacgggctcaccacgctgcgt
gatcctcacgtgaaggtcgagggcggggagctgcgtttccagttcaagggcaagagcggc
aagacctggaacctcaaggtcagggaccgacgcatcgcgaggatcgtcaaggcctgccag
gatctgccggggcagcatctcttccagtatctggacgagacgggcacgcagcaatccgtc
acgtccgccgacgtgaacgcctatctgcgcgagatcaccgggcgcgacatcaccgcgaag
gatttcaggacctgggccggaaccgtgctcgcggccctcgccctgtccgagttcgaagaa
ttcgacagcgaggccatggcgaagaagaacatccgctccgccatcgagacggtcgctgca
cgcctcggcaacacgccggccatctgccgcaaatgctatgtgcatcccgaggtcttctcg
acctatctcgacggtgggcttctcctggaaatccgggaggaggtggaggcggaactgcgc
gagaacctgccggcgctcaagcccgaggaggcagctgttctctcgctcctgcaggcccgc
ctgtcggcggaggccgcctcgtccaaggcaaagtccaactccaaggccgtatccaattcc
aaggcgccgaaaacaaagcgcagcccgcgcaaaacgagccacggcgcggaagcgcgggcc
tga
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