Microvirga sp. 17 mud 1-3: C4E04_06150
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Entry
C4E04_06150 CDS
T05470
Name
(GenBank) ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv02010
ABC transporters
miv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4E04_06150
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
C4E04_06150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
miv02000
]
C4E04_06150
Transporters [BR:
miv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
C4E04_06150
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
Motif
Other DBs
NCBI-ProteinID:
AWM86360
LinkDB
All DBs
Position
complement(1317238..1318188)
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AA seq
316 aa
AA seq
DB search
MKLSRLTCSLAVLAGLAIPGMASPVLAKDLTSVGISVGSLGNPFFVATIKGIEDKAKAIN
PNVKITSVSSDYDLNKQFTQVDNFIASGVNILMLNAVDPVAIEPSVKRAQAAGMVVAAFD
VAAAGADVTVMTDNVKAGAIACQYIVDHLKGKGDVLIVNGPQVSSITDRVKGCKGVFDKN
PGIKILSDNQDAKGSRDGGFAVTQSLLTRFPKIDAIFAINDPTAIGASLAAKQLNRNEFI
ITSVDGAPDIESELKSGNSLIKASASQDPYVMAGQALELAAGILNGKKPEKNVILLDPKL
ITAENVGEYKGWTAAR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcccggcttacctgcagcctcgccgtccttgccggcctggcaattcccggc
atggccagtccggtcctggccaaggacctgacgagcgtcggcatctcggtcggatccctc
ggcaatccgttcttcgtcgccaccatcaagggcatcgaggacaaggcgaaggccatcaac
ccgaacgtgaaaatcacctcggtctcgtcggactacgacctcaacaagcagttcacccag
gtcgacaacttcatcgcgtccggcgtgaacatcctcatgctcaacgcggtcgatccggtc
gccatcgagccctccgtcaagcgggcccaggcggccggcatggtggtggcagcctttgac
gtggcggcagcgggcgcagacgtgaccgtgatgaccgacaacgtcaaggccggcgcgatc
gcctgccagtacatcgtcgatcacctgaagggcaaaggcgacgtcctgatcgtgaacggt
ccccaggtctcctccatcacggaccgcgtaaagggctgcaagggcgtcttcgacaagaac
ccgggcatcaagatcctgtccgacaaccaggacgccaagggctcccgcgacggcggcttc
gccgtgacccagagcctgctgacccgttttccgaagatcgacgcgatcttcgcgatcaac
gacccgaccgccatcggcgcaagccttgcggccaagcagctcaatcggaacgagttcatc
attacgtccgtcgacggcgcgccggacatcgaatccgagctgaaatccggcaactccctc
atcaaggcctcggcctcgcaggatccttacgtgatggctgggcaggccctggaactcgca
gccggcatcctcaacggcaagaagcccgagaagaacgtgatcctgctcgatccgaagctg
atcaccgccgagaatgtcggagagtacaaaggatggacggccgcgcgttga
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