KEGG   Microvirga sp. 17 mud 1-3: C4E04_06330
Entry
C4E04_06330       CDS       T05470                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
miv  Microvirga sp. 17 mud 1-3
Pathway
miv00300  Lysine biosynthesis
miv00470  D-Amino acid metabolism
miv01100  Metabolic pathways
miv01110  Biosynthesis of secondary metabolites
miv01120  Microbial metabolism in diverse environments
miv01230  Biosynthesis of amino acids
Module
miv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:miv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C4E04_06330 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C4E04_06330 (dapF)
Enzymes [BR:miv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     C4E04_06330 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AWM89021
UniProt: A0A2Z3IKP4
LinkDB
Position
complement(1360139..1360984)
AA seq 281 aa
MHGLGNDFVIVDGRAEPFRPSAEVIRLICDRHEGIGGDQLLVIEQPTVPGADGRMRIYNV
DGTEAQTCLNATRCVIWLLLQESRKGSVVLETLGGAIEGSSPDAERVALRLGAPRWDWDA
IPLAESRDTLRLDLASGPLAEPTALSLGNPHLVCFVADRDAVDVPRWAPALQNAPLLPEG
ANIGVAELVAPDRLRLVVWERPGILTRACGSGACAAVLAARRRGLTSESRVAVDMPGGLL
EVEVRDDDGLVLTGPVAVAFSGHIPETMQRAGAAPDKESRP
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcatggattgggcaacgatttcgtcatcgtcgacggccgcgccgagccgttccgcccc
tcggccgaggtcatccgcctcatctgcgaccgccacgagggcatcggcggagaccagctt
ctcgtcatcgaacagccgaccgtgcccggtgccgatggccggatgcggatctacaacgtg
gacggcacggaggcccagacctgcctgaacgccacgcgctgcgtcatctggctcctgctt
caggagagccggaaaggttcggtcgtgctcgagaccctcggcggcgccatcgaaggctcc
agcccggatgccgaaagggtcgccctccggctcggagccccgcgctgggactgggacgcc
atcccgctggcggagtcccgggacacccttcgcctcgacctggcgtccggccccctcgcg
gagccgaccgccctcagcctgggcaacccgcatctcgtctgcttcgtggcggaccgggat
gccgtcgacgttccccgttgggcgccggcgctccagaatgcccctctcctgcccgagggt
gccaatatcggcgtggcggaactcgtcgcgccggacaggctccgcctcgtcgtctgggag
cggcccggcatcctgacccgcgcctgcggaagcggagcctgcgcggccgtgctggcggca
cgccgtcggggcctgacgtcggagagccgcgttgccgtggacatgcccggcggcctcctg
gaggtcgaagtccgggacgatgacgggctcgtcctgaccggcccggtggcggtcgcgttc
tccggacatatccccgagaccatgcaacgggccggcgcggctccagacaaggagagccgg
ccatga

DBGET integrated database retrieval system