Microvirga sp. 17 mud 1-3: C4E04_06330
Help
Entry
C4E04_06330 CDS
T05470
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00300
Lysine biosynthesis
miv00470
D-Amino acid metabolism
miv01100
Metabolic pathways
miv01110
Biosynthesis of secondary metabolites
miv01120
Microbial metabolism in diverse environments
miv01230
Biosynthesis of amino acids
Module
miv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4E04_06330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4E04_06330 (dapF)
Enzymes [BR:
miv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C4E04_06330 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AWM89021
UniProt:
A0A2Z3IKP4
LinkDB
All DBs
Position
complement(1360139..1360984)
Genome browser
AA seq
281 aa
AA seq
DB search
MHGLGNDFVIVDGRAEPFRPSAEVIRLICDRHEGIGGDQLLVIEQPTVPGADGRMRIYNV
DGTEAQTCLNATRCVIWLLLQESRKGSVVLETLGGAIEGSSPDAERVALRLGAPRWDWDA
IPLAESRDTLRLDLASGPLAEPTALSLGNPHLVCFVADRDAVDVPRWAPALQNAPLLPEG
ANIGVAELVAPDRLRLVVWERPGILTRACGSGACAAVLAARRRGLTSESRVAVDMPGGLL
EVEVRDDDGLVLTGPVAVAFSGHIPETMQRAGAAPDKESRP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcatggattgggcaacgatttcgtcatcgtcgacggccgcgccgagccgttccgcccc
tcggccgaggtcatccgcctcatctgcgaccgccacgagggcatcggcggagaccagctt
ctcgtcatcgaacagccgaccgtgcccggtgccgatggccggatgcggatctacaacgtg
gacggcacggaggcccagacctgcctgaacgccacgcgctgcgtcatctggctcctgctt
caggagagccggaaaggttcggtcgtgctcgagaccctcggcggcgccatcgaaggctcc
agcccggatgccgaaagggtcgccctccggctcggagccccgcgctgggactgggacgcc
atcccgctggcggagtcccgggacacccttcgcctcgacctggcgtccggccccctcgcg
gagccgaccgccctcagcctgggcaacccgcatctcgtctgcttcgtggcggaccgggat
gccgtcgacgttccccgttgggcgccggcgctccagaatgcccctctcctgcccgagggt
gccaatatcggcgtggcggaactcgtcgcgccggacaggctccgcctcgtcgtctgggag
cggcccggcatcctgacccgcgcctgcggaagcggagcctgcgcggccgtgctggcggca
cgccgtcggggcctgacgtcggagagccgcgttgccgtggacatgcccggcggcctcctg
gaggtcgaagtccgggacgatgacgggctcgtcctgaccggcccggtggcggtcgcgttc
tccggacatatccccgagaccatgcaacgggccggcgcggctccagacaaggagagccgg
ccatga
DBGET
integrated database retrieval system