Microvirga sp. 17 mud 1-3: C4E04_06965
Help
Entry
C4E04_06965 CDS
T05470
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4E04_06965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
miv02000
]
C4E04_06965
Transporters [BR:
miv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4E04_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AWM86498
UniProt:
A0A2Z3I3P7
LinkDB
All DBs
Position
1491378..1493051
Genome browser
AA seq
557 aa
AA seq
DB search
MIVSLTNRFKNRPVLAAAAGAVFLTGSLTWGSVTKAAGASETPVKGGTLVYLEQQPHTNL
YPPAGGFYPNGGILNQITDKLTYQNPETLEIEPWIAESWTVNADATEYTFKIRKGVTFSD
GTPLDAAAVAKNYDVYGRGSKDLKLPISEVINNYDRSEVIDPQTVKFYFKKPSPGFLQGT
SVIGSGLVSLATLALPYEALGDATKIIGSGPFVVAAETLGRELTLNARTDYNWGPAKLAQ
QGRAYLDTIKYIITPEDSVRIGALLAGQADVIRQVQAYDEKQVEDEGYLIYAPSTRGVNN
SVVFRPDNPLVADIRVRRALLHATNADEIVSTLFSANYPKATSIIAKTALGYVDLSSRLS
YDLEKAKALLDEAGWKEGTNGLRQKDGQVLELTAYESLPQPQNKETLQLVSQQWGKIGVK
LNVLTADSGSATVNNLDPAKAPVSPAMVGRADPDVIKSQYYPTNRNVLLQKGGNSDKVQT
FLDEKLNTLLDNLASEPDRAKRLAIAGDVQAYVVDQAYAIPIFEEPQAFAAAPYVKGLSF
EAVGRPSFYGTWLAPRH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtcgctcaccaatcgcttcaaaaacaggcctgtcctcgctgccgccgcaggt
gccgtcttcctgacgggttcgttgacatggggcagcgtcacgaaggccgccggcgcaagt
gagacgccggtcaagggcggcacgctggtttatctggagcagcagcctcatacgaatctc
tatccgcctgccggcggcttttatccgaatggcggcatcctcaaccagatcaccgacaag
ctgacctaccagaatcccgagactctcgaaatcgagccctggatcgcagaatcatggacg
gtcaatgccgatgcgaccgagtacacgttcaagatccgcaagggcgttacgttctcggac
ggaacgccgctcgatgccgctgccgtggcgaaaaattacgacgtttacgggcgcggcagc
aaggacctgaagcttccgatctcggaagtgatcaacaattacgaccgcagcgaggtgatc
gatccgcaaaccgtcaaattctacttcaagaaaccgtcgcccggcttcctgcagggaacg
tccgtgatcggctccggtctcgtctcgctcgcgacgcttgcgctgccctatgaggccctt
ggcgatgccacgaagatcatcggctccggacccttcgtggtggcggctgaaacgttaggg
cgggaactcacgcttaatgcgcggaccgactacaattggggaccggccaagctcgcgcag
cagggccgggcttatctcgacaccatcaagtacatcatcacgcccgaggacagcgtgcgc
atcggcgcgctgctggccgggcaggccgacgtcattcgccaggtccaggcctatgacgaa
aagcaggtcgaggacgaagggtatctcatctacgcgccttccacacggggcgtgaacaac
agcgtcgtgttccgccccgacaatccactcgttgccgatatccgcgtacgccgcgccttg
ctgcacgcgaccaatgcggacgagatcgtctcgaccctgttctctgccaactacccgaag
gccacgtccatcatcgccaagacggccctcggctatgtcgacctgtcgtccaggctttcc
tatgatctcgagaaggccaaggcgctgctcgacgaggcaggctggaaagagggcacgaac
ggccttcgtcagaaggacggtcaggtcctggagctgacggcctatgaatccctgccgcag
ccgcagaacaaggagacgctgcagctggtctcccagcaatggggcaagatcggcgtgaag
ctgaatgttctcacggccgattcaggcagcgcgacggtgaacaatctcgatcctgcaaag
gcgcccgtgtcccccgccatggtcggccgtgccgatcccgacgtgattaagagccagtat
tatccgacgaaccggaacgtgctgctgcagaaaggcggcaacagcgacaaggtccagacc
ttcctggacgagaagctgaacacgctcctcgacaacctggcgtccgagccggatcgcgca
aaacgcctcgccattgcgggtgatgtgcaggcctatgtcgtcgatcaggcctacgccatt
ccgatcttcgaggagccgcaggcctttgcggccgccccttacgtgaaaggcctgtcgttc
gaggccgtcggacgtcccagtttctacggcacctggctcgcgccgcgtcactaa
DBGET
integrated database retrieval system
