Microvirga sp. 17 mud 1-3: C4E04_08145
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Entry
C4E04_08145 CDS
T05470
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
miv03009
]
C4E04_08145
Enzymes [BR:
miv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
C4E04_08145
Ribosome biogenesis [BR:
miv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4E04_08145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWM86700
LinkDB
All DBs
Position
1727719..1728951
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AA seq
410 aa
AA seq
DB search
MRQSGSGRNGGRGGRSGMREKSRTREGARARQGEAKKPRSAKPAAERKPRPAVAPRPKPA
EAPRQPTRAEAKAAAQETLATGVQTLVVEPDEADMRVDRFLVARFPQLAFTHIQRIVRKG
ELRVDGKRAQPNDRLLAGQKVRIPPLKLDQPKLVARSTARDQSDRDFLKSITLYEDKDVL
IINKPMGLAVQGGSGTTRHVDGLLDSMRDAEGQKPRLVHRLDKDTAGCLVIAKTRFAAST
MAKSFRSRTTRKIYWALVAGVPRVRQGRISTYLAKEGEEGDARMRVAKHGDEGASHALTY
YAVVDTAAHKLAWLSLKPVTGRTHQLRAHAAHIGHPIVGDPKYFDIENWELPGGIQNKLH
LLARRIVIAHPRTGKPIDVTAPLPPHMQQSFNLLGFDTGRYDPIVDAPEE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagacagagcggttcaggacgaaacggcgggcgcggcgggcggtcgggcatgcgggag
aaatcccgtacccgtgagggcgcgcgcgcacgccagggcgaagcgaagaagccccggagc
gcaaagcccgcggccgagaggaagccccgcccggcggtggcgccccgtccgaaacctgcg
gaagcgccacgtcagccgacccgggccgaggcgaaggctgctgcccaggagaccctggcg
acgggcgtccagacccttgtggtggagccggatgaagcggatatgcgcgtcgaccggttc
ctggtggcacgcttcccccagctcgccttcacgcatatccagcgcatcgtccgaaaggga
gagctgcgcgtcgacggcaagcgggcgcagccgaacgaccgcctgctggcgggccagaag
gtccgcattcccccgctcaagctcgaccagcccaagctcgtggcgcgcagcaccgcccgg
gatcagagcgatcgggatttcctgaaatccatcaccctctacgaggacaaggacgtcctc
atcatcaacaagcccatggggctcgcggtccagggcggctccggcaccacgcgccatgtg
gacgggcttctcgattccatgcgggacgccgagggccagaagccccggctcgtgcaccgg
ctcgacaaggacacggcgggctgcctcgttattgccaagacgcgctttgcggcctcgacc
atggcgaaatcgttccgctcgcgcacgacccgcaagatctattgggcgctcgtggccggc
gtgccgcgcgtccgccagggccgcatctcgacctatctggcgaaggagggcgaggagggc
gatgcccggatgcgggtggccaagcacggagacgagggtgcgagccacgcgctcacctat
tacgcggtcgtggacacggccgcgcataaactggcctggctgtccctcaagccggtgacg
gggcgcacccaccagctgcgcgcccatgcggctcatatcggccatcccatcgtgggcgat
ccgaaatatttcgacatcgagaactgggaactgcccggcggcattcagaacaagctgcat
ctgctcgcccggcgtatcgtgatcgcgcatcccaggaccggcaagcccatcgacgtgacg
gcgcccctgccgccgcacatgcagcagagcttcaatctcctgggattcgacacaggtcga
tacgatcccatcgtggacgcgccggaggaatag
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