Microvirga sp. 17 mud 1-3: C4E04_08975
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Entry
C4E04_08975 CDS
T05470
Name
(GenBank) hybrid sensor histidine kinase/response regulator
Organism
miv
Microvirga sp. 17 mud 1-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
PDE8A_N
RNase_Y_N
CASP_C
PMC2NT
DUF4527
Motif
Other DBs
NCBI-ProteinID:
AWM86842
UniProt:
A0A2Z3IC86
LinkDB
All DBs
Position
1882208..1887502
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AA seq
1764 aa
AA seq
DB search
MSKVEPAFTQLDPKLLLKTLRAFRKGDFSARLPSDLTGIDGEIAEAFNDIGDLNQGIGRE
LDRLAKVVGKEGRIEERGRLAGATGAWSGCIESVNSMIGDIVQPTVEVARVIGAVAKGDL
SQEIELENDGRPLRGEFLRIGKIVNTMVGQLGSFASEVTRVAREVGSEGKLGGQAKVKGV
AGTWKDLTDNVNLMAANLTGQVRNIAEVTTAVANGDLSKKITVEVRGEILELKDTINTMV
DQLNSFASEVTRVAREVGSEGKLGGQARVEGVAGTWKDLTDNVNLMAANLTGQVRNIAEV
TTAVANGDLSKKITVEVRGEILELKDTINTMVDQLNSFASEVTRVAREVGSEGKLGGQAR
VEGVAGTWKDLTDNVNLMAANLTGQVRNIAEVTTAVANGDLSKKITVEVRGEILELKDTI
NTMVDQLNSFASEVTRVAREVGSEGKLGGQARVEGVAGTWKDLTDNVNLMAANLTGQVRN
IAEVTTAVANGDLSKKITVEVRGEILELKSTINTMVDQLNSFASEVTRVAKEVGSEGKLG
GQARVEGVGGVWKDLTDNVNMMGNNLTGQVRNIAEVTTAVANGDLSKKITVEVKGEILAL
KSTINTMVDQLNSFAGEVTRVAREVGIEGKLGGQAEVRGVAGTWKDLTDNVNMMANNLTG
QVRGIASVVTAVAEGDLKRKLTVDAKGEIAALAETINEMIDTLATFADQVTNVAREVGVE
GKLGGQARVPGAAGLWRDLTDNVNQLAANLTTQVRAIAEVATAVTKGDLTRSISVEASGE
LASLKDNVNEMIRNLRDTTLKNAEQDWLKTNLAKFTRMLQGERDLTTVSNMILSEIAPLV
NAQQGVFYTMENNDGEPVLELVASYAFTERKRLNNRFRLREGLVGQVAYEKKRILLTSVP
GDYITIGSALGEAPPLNIIVLPVLFEQEVKAVIELASFSRFSETHQSFLEQLTESIGIVL
NTIAANMRTEGLLKQSQLLTTELQSQQEELRNTNDRLEHQAATLRQSEELLRQQQEALQK
TNEELEDKARLLELQKQEVEAKNQEVSIAKTALEEKAEQLSMTSRYKSQFLANMSHELRT
PLNSLLILSKLLTENSEGNLSDKQKEFAKTIHAAGSDLLSLINDILDLSKIESGTVSLEI
SSIDLKDLTGNMERTFAQIAAERDLDFQIEVDPQLPQSIRTDSKRLQQVLRNLLSNAFKF
TERGGVTLRIGTAEGSPLRAGSQWIAMSVIDTGIGIPEDKQRIIFEAFQQADGTTSRKYG
GTGLGLAISREIARLLGGEIVVSSTAGNGSTFTLFIPAEPPASHGVTGASSLVRLNGDGA
GQSSGLENGSASILRQPSAAMALSASLDDRHAITVGDRVVLIVEDDAMFASVLLELAREQ
GFKGLIAMDGASALALAHRYKPHAITLDIGLPDMDGWALLDLLKHDPRTRHVPIHVISVD
DQKKRGLKAGAFGFLEKPVDREALMGALDRTKEFIARPVKNLLLVEDDDNQRMSLSELMK
SEQVDVTAVGTAEGALEIIQARQFDCAIVDLGLPDLPGVELIERIRKMKGGDDLPIVIYT
GQDLSRDEELRLESVAATVIVKEEGSSARLLNDTALFLHRTISAIPDEGSIIIEHKSDGT
LEGRTVLVIDDDMRNIFSLASALEQYGMAVVFAENGREGIEKLDATPDVDIALVDIMMPE
MDGYETMQEIRKIPRYRDLPLVAVTAKAMKGDREKCLEAGATDYVSKPVDIDQLLAVLRV
QLSRSTYVPNGTTLNDAPEAGLNS
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggttgaacctgctttcacgcaacttgatccaaagttgcttctgaagaccctg
cgcgccttccggaaaggtgatttctcagcacggttgccgtccgatctgaccggcatcgat
ggcgagatcgcggaagctttcaacgacatcggagatctgaaccaaggaatcggtcgcgaa
ctcgaccgccttgcaaaggttgtcggtaaagaggggcggatcgaggaacggggacgtttg
gctggcgcgacaggcgcttggagcgggtgcatcgagtccgtcaattccatgatcggcgac
attgtccaaccgaccgtcgaggtggcgcgggtgatcggcgcggtggccaaaggcgatctc
agccaggagatcgagcttgaaaacgatggccgccccctgcgtggggagttcctgcggatc
ggcaagatcgtcaacaccatggtgggtcagctcggcagtttcgcgtcggaggtgacacgc
gtcgcccgcgaggtgggttcggagggcaagctcggcggacaggctaaggtcaagggcgtc
gcagggacgtggaaagacctgacggacaacgtcaatctcatggccgcgaacctcacaggc
caggtgcgcaacattgccgaagtcacaacggcagtcgcgaacggcgacctgtcgaagaag
atcaccgtggaggtacggggcgaaatcctggagctgaaggacaccatcaacactatggtg
gaccagctcaattcgtttgcatccgaggtgacacgcgtcgcccgcgaggtgggttcggaa
ggcaagctcggcggacaggcgcgggtggaaggtgtcgcgggcacctggaaggacctgacg
gacaacgttaacctgatggccgcaaacctgacaggacaggtccgcaacattgccgaggtc
acaacggcagtcgcgaatggcgacctgtcaaagaagatcaccgtggaggtgaggggcgag
atcctggagctgaaggacaccatcaacactatggtggaccagctcaactcctttgcgtcg
gaggtgacgcgtgttgctcgcgaggtgggctcggagggcaagctaggaggacaggccagg
gtggaaggcgtcgcgggcacctggaaggacctgaccgacaacgtcaacctgatggctgcg
aacctcacaggccaggtgcgcaacattgccgaagtcacaacggcagtcgcgaacggcgac
ctgtcgaagaagatcaccgtggaggtacggggcgaaatcctggagctgaaggacaccatc
aacactatggtggaccagctcaattcgtttgcatccgaggtgacacgcgtcgcccgcgag
gtgggttcggaaggcaagctcggcggacaggcgcgggtggaaggtgtcgcgggcacctgg
aaggacctgacggacaacgttaacctgatggccgcaaacctgacaggacaggtccgcaac
attgccgaggtcacaacggcagtcgcgaatggcgacctgtcaaagaagatcaccgtggag
gtgcgaggcgagatcctggagctgaaatcgaccatcaataccatggtggaccagctcaat
tccttcgcgtccgaggtgacacgcgtcgccaaggaagtgggctcggagggcaagctcggc
gggcaggccagggtcgagggcgtcggaggcgtctggaaggacctgaccgacaacgtcaat
atgatggggaacaacctcaccggtcaggtgcgcaatatcgccgaagtcaccactgcggtc
gcgaacggtgacctgtccaagaagatcaccgtggaggtaaagggcgagatccttgcgctc
aagtccaccatcaacaccatggtggaccagctcaactccttcgccggagaagtgacccgc
gtcgcccgcgaggtcggcatcgaaggcaagctcggcgggcaggccgaggtacgcggcgtc
gccgggacctggaaggatctgaccgacaacgtgaacatgatggcgaacaacctgaccggc
caggtgcgcggcatcgcgagcgtcgtgacggctgtcgccgagggcgacctcaagcgcaaa
ctaaccgtggatgccaagggcgaaatcgccgcgcttgctgaaacgatcaacgagatgatc
gacaccctggcgaccttcgcggaccaggttacgaacgtggcgcgcgaagtgggagtggag
ggcaagctcggtggacaggcccgggtgcctggcgccgcgggcctgtggcgcgacctgacc
gacaacgtgaaccagctggcggctaacctgacaacgcaggtgcgagccatcgcggaagtc
gccactgctgtgaccaagggcgacctgacgaggtctatttcggtggaagcctcgggcgag
cttgcctcgctcaaggacaacgtcaacgagatgatccgcaacctgcgcgacacgacgctc
aagaacgcggaacaggactggctcaagaccaatctcgccaagtttacccgtatgctgcag
ggcgagcgtgatctcactacagtctcgaacatgatcctgtcggagatcgctcccctggtg
aacgcacagcagggtgtcttctacacaatggagaataacgacggcgagccggttctcgaa
cttgttgcatcctatgccttcacggagcggaaacgcctcaacaaccgtttccgcctgaga
gaaggccttgtcggccaagtcgcctatgagaaaaagcgcattctgcttacgagcgtcccg
ggtgactatatcaccatcggctcggcgctcggcgaggcgccgcccctcaacatcatcgtc
ctgccggtcctgttcgagcaggaggtcaaggcggttatcgagcttgcctcgttcagccgc
ttctcggaaacccatcaatccttcctcgagcagttgacggaatcgatcgggatcgtgctc
aacacgatcgcagccaacatgcgcacggagggcttgctcaagcagtctcagctgctcacg
actgaacttcaaagccagcaggaggagctgagaaacacgaacgaccggctcgagcatcaa
gctgccaccttgcgtcaatccgaggagctcctgcgccagcagcaagaggcacttcagaag
acgaacgaggaactggaggacaaggctcggctgctcgaacttcagaagcaggaggttgag
gccaagaaccaggaggtctcgattgcaaagacggccctcgaggagaaggccgagcagctg
tcgatgacttcgcgctacaagtcgcagttcctggccaatatgagccatgagttgcgcacc
ccgctcaactcgttgcttatcctgtcgaagcttctaaccgagaattcggaaggcaacctg
agcgataagcagaaggaatttgccaagactatccatgccgcggggtcagacctgctgtcc
ctcatcaatgacattctggatctgtccaagatcgaatccggcacagtgagccttgagatt
tcaagcatcgacctcaaggatctgaccggcaatatggagcgcaccttcgcccagatcgca
gcggagcgggacctcgacttccagatcgaggtcgatccgcaattaccgcaaagcatccgg
acggactcgaagcgcctgcagcaggtgctgcggaacctgctttctaacgccttcaagttc
acggagcgtgggggtgtgacgctccggattggaacggcagagggttcgcccttgcgtgca
ggtagccaatggatcgccatgtcggtcatcgatacgggcatcgggatccctgaggacaag
cagcgcatcatcttcgaggcgttccagcaggcggatggcacaacgagccgcaaatatggc
ggtaccggtctcggcctcgccatcagccgtgagatcgcccgcctcctgggcggcgagatc
gtggtgtcgagcactgcgggcaatggctccaccttcacgctcttcatcccggccgagccg
ccggcaagccatggtgtgaccggtgcctcatccttggttcgcctgaacggcgatggagca
gggcagtcttccggcctcgaaaacggctccgcctcaatcctccggcagccatcggccgcg
atggctctttcggcctccctcgacgaccgccacgcgatcacggtgggcgaccgtgtcgtt
ctcatcgtcgaggacgacgctatgtttgcctcggtgttgctggaacttgcccgtgagcag
gggttcaaggggctcatcgccatggatggcgcttccgcacttgcacttgcgcatcgttac
aagccgcatgcgatcaccctcgatatcggcctgcccgacatggatggttgggcgttgctt
gatctgttgaagcatgaccccaggacccggcacgtacctattcatgtcatttccgtcgat
gaccagaagaagcgcggtctgaaagcgggcgctttcgggttcctcgaaaagccggttgac
cgcgaagccctcatgggggctctcgaccgcacgaaggagttcatcgcccgacctgtgaag
aacctccttctcgtggaggatgacgacaaccagcgcatgagtctgtcggaactcatgaaa
agcgagcaggtggatgtgacggccgttgggactgcggaaggggccttggagataatccag
gctcggcaattcgactgcgccatcgtcgatcttgggttgccggatcttccgggtgtcgag
ctgatcgaacggatccggaagatgaagggaggcgacgatctgccgatcgtcatctatacg
gggcaagacctcagccgcgatgaggagctccgcctggagagtgtcgccgccacggtcatc
gtcaaggaggaaggatcctccgcgaggctcctgaacgatacggcgctgttccttcatcgg
acgatcagcgcgatcccggatgaaggctccattatcatcgaacacaagtccgacggcacg
ctggagggacggactgtccttgtgatcgacgacgacatgcggaacatcttctcgcttgcg
agcgctctcgagcagtatgggatggcggtggtatttgccgagaatggccgtgaaggcatc
gagaagctggacgccacgccggacgtggacatcgccttggtcgacatcatgatgccggag
atggacggttatgaaaccatgcaggagatccgcaagatcccccgctatcgtgacctcccg
ctcgtagcggtgaccgccaaggccatgaagggcgatcgagaaaagtgcctggaggccgga
gccacggactacgtctcgaaacctgtggatatcgatcaacttcttgccgtcttgcgcgtt
caacttagccgtagcacctacgttcccaacggaacgacgctaaatgacgccccagaagcc
ggattgaattcatga
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