Microvirga sp. 17 mud 1-3: C4E04_09495
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Entry
C4E04_09495 CDS
T05470
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_09495
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4E04_09495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_16
AAA_22
nSTAND_NTPase5
AAA_30
MeaB
RecA_N
nSTAND3
AAA
AAA_5
NTPase_1
Lon_C
ADK_lid
SLFN-g3_helicase
VirC1
NPHP3_N
ABC_tran
APS_kinase
CbiA
DAP3
AAA_24
NACHT
MCM
ATPase_2
AAA_14
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
AWM86937
LinkDB
All DBs
Position
complement(2005409..2006815)
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AA seq
468 aa
AA seq
DB search
MAKRQASFACQECGAVYNRWKGKCEACGGWNTIVEETGSANPMVGPVATRPSRAKGRIFP
LEGLSGEAKEAPRTPSGIAELDRVTGGGFVHGSIILLGGDPGIGKSTLLMQATAALANRG
ERVAYISGEEAVAQVRLRAERLGLGQAPVELASETNVEDIVATLSQGRPPALAIIDSIQT
MWTETVESAPGTVTQVRGSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVV
SFEGDTGHHFRILRAVKNRFGPTDEIGVFEMSDRGLREVPNPSELFLAGRDLATPGTAVF
AGMEGTRPLLVEIQALVAPSSLGTPRRAVVGWDPARLSMVLAVLEAHGGLRLGMHDVYLN
VAGGLRITEPAADLAAAAALVSSLSGNPLPPDTVYFGELGLSGAIRPVAQAEARLKEAAK
LGFASAVSPPARTDRKERLPLAASSIGHITDLVAGIAARQNRLARSRA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtcaggcctccttcgcgtgccaggaatgcggcgcggtctacaatcgctgg
aagggcaaatgcgaggcctgcggcggctggaacaccatcgtcgaggagaccggctctgcg
aacccgatggtcggccccgtggccacgcgcccgtcccgcgccaagggccggatcttcccg
ctcgagggcctttcgggcgaggcgaaggaggctccgcgcacgccttctggcatcgcggag
ctcgaccgggtgaccggcggcggcttcgtccacggctccatcatccttctcggcggcgat
ccgggcatcggcaagtcgaccctcctcatgcaggccacggccgctctggcgaaccggggt
gagcgggtcgcgtacatttcgggtgaggaggcggtggcgcaggtgcgccttagggccgag
cgcctcggcctcggccaggcgcccgtggagctcgcctccgaaaccaacgtggaagacatc
gtcgcgactctgtcccagggccgcccgccggcgcttgcgatcatcgactcgatccagacc
atgtggaccgagacggtcgaatccgcccccggcaccgtgacccaggtgcgcggcagcgcc
caggcgctgatccggttcgccaagactaccggcacggccgtgatcctggtgggccacgtg
accaaggacgggcagatcgccggtccccgcgtcgtcgagcacatggtcgacgcagtcgtc
tccttcgagggcgatacgggccaccatttccgcatcctgcgcgccgtgaagaatcgcttc
ggaccgaccgacgagatcggcgtgttcgagatgtccgaccgaggcctgcgcgaggtgccg
aatccctccgagctctttctggccgggcgcgatctcgcgacgcccggaacggcagtcttt
gccggcatggagggcacccgcccgctcctcgtggaaatccaggccctcgtcgctccctcg
tccctcggcaccccgcgccgggccgtcgtgggctgggatccggcgcgcctgtccatggtg
ctcgccgtgctggaggctcatgggggcctccgtctcgggatgcacgacgtttacctgaac
gtcgcgggcggcctgcgcatcacggagcctgccgccgatctcgcggcggcagccgccctg
gtctcgtcgctctcgggcaatcccctgccgcccgacacggtttatttcggcgagctcggc
ctgtccggcgccatccggcccgtcgcccaggccgaggcgcggctgaaggaagccgccaag
ctcggctttgccagtgccgtttctcccccggcccggaccgaccggaaggagcgtctgccc
ctggcagcctcctccatcgggcacatcaccgacctggtggccgggatcgcagcgcgccag
aaccggcttgcccgctcccgggcctga
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