Microvirga sp. 17 mud 1-3: C4E04_09550
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Entry
C4E04_09550 CDS
T05470
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C4E04_09550 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miv03019
]
C4E04_09550 (rnc)
03009 Ribosome biogenesis [BR:
miv03009
]
C4E04_09550 (rnc)
03036 Chromosome and associated proteins [BR:
miv03036
]
C4E04_09550 (rnc)
Enzymes [BR:
miv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C4E04_09550 (rnc)
Messenger RNA biogenesis [BR:
miv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C4E04_09550 (rnc)
Ribosome biogenesis [BR:
miv03009
]
Eukaryotic type
90S particles
RNase
C4E04_09550 (rnc)
Prokaryotic type
rRNA processing factors
C4E04_09550 (rnc)
Chromosome and associated proteins [BR:
miv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C4E04_09550 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AWM86948
LinkDB
All DBs
Position
2015457..2016245
Genome browser
AA seq
262 aa
AA seq
DB search
MRPSGGPGNGRAISGGTGCSSGSADPVARRTPQPDQLQETLGYSFERPELLTEALTHVSA
PNAGGQSYQRLEFLGDRVLGLIVAEMLYETFPHSPEGELSRRLAELVRRESCAEVAIAWD
VGPYLRLGAGEAQSGERRNLTILADVCEAIIGAVFLDGGYDAAKTLVVGAFGVLLHAPRR
PLRDPKSALQEWAQGKGLPPPTYTVVEQTGPDHAPKFRVAVKVRGVESDFGLGTSKRAAE
QEAARSLLVREGIWTEEDKSHG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctctggcggccctggcaatggccgagccatatccggtggaaccggatgttcg
agcggatccgctgatcccgtggctcgccgtacgccccagcccgaccagctccaggagacg
ctcggctacagcttcgagcggcccgaactgctgacggaggcgctcacgcatgtgagcgcg
ccgaatgcgggcgggcagagctatcagaggctggagttcctgggcgacagggtgctgggc
ctgatcgtggccgaaatgctctacgagaccttcccgcactcgccggaaggagagttgtcc
cgccggctggcggagctggtccgccgcgaaagctgcgccgaggtcgccatcgcctgggac
gtcggcccctatctcaggctcggcgccggcgaggcccagtcgggcgagcgacgcaacctg
acgatcctggcggatgtgtgcgaggcgatcatcggggcggtcttcctcgacggtggttac
gatgccgccaagaccttggtggtgggggccttcggcgtcctgctccacgcgccccgcagg
cccctgcgcgatccgaagagcgctctgcaggaatgggcgcagggcaagggccttccgccg
cccacctatacggtggtcgagcagaccggccctgatcatgcgccgaaattccgcgtggct
gtgaaggtgcggggggtcgagagtgatttcggcctcggcacctcgaagcgcgcggcggaa
caggaggcggccagaagccttcttgtccgtgaaggaatctggacggaggaagacaagagc
catggctga
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