Microvirga sp. 17 mud 1-3: C4E04_10010
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Entry
C4E04_10010 CDS
T05470
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
miv03009
]
C4E04_10010
Enzymes [BR:
miv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C4E04_10010
Ribosome biogenesis [BR:
miv03009
]
Prokaryotic type
ribosomal protein modification factors
C4E04_10010
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
CLP1_P
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AWM87034
UniProt:
A0A2Z3I539
LinkDB
All DBs
Position
complement(2108438..2109754)
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AA seq
438 aa
AA seq
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MNAPAPKVSFVSLGCPKALVDSERIITQLRAQGYELTKRHDGADVVIVNTCGFLDSAKAE
SLEAIGSAMAENGKVIVTGCMGAEPEQIRDRFPNVLAITGPQQYESVVGAVHQAAPPAHD
PFVDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPIGDVLREAEKLAK
AGVKEILVISQDTSAYGLDIKYQPSLWQDREVRTRFYDLARELGEMGLWTRMHYVYPYPH
VDEVIPLMAEGKILPYLDIPFQHASPTVLKAMRRPAHQEKTLDRIRKWREICPDLAIRST
FIVGFPGETDEDVDFVLDWLKEAKLDRVGCFRYEPVQGAPANELAGAVPQEVKDERWHRF
MKTQREVSARLQKAKVGKRLPVIIDEPGATVAKGRTKYDAPEIDGNVYVASRRPLRAGDI
VTVKIERSDEYDLHGTAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgcacctaaagtctcgtttgtatccctcggctgcccgaaggcgcttgtc
gattcggaacggatcatcacgcagctccgggcccagggctacgagctgaccaagcgtcat
gacggtgcggacgtggtgatcgtcaacacctgcggcttcctcgacagcgcaaaggcggaa
tccctcgaggccatcggctcggccatggccgagaatggcaaggtgatcgtcaccggctgc
atgggcgccgagccggagcagatccgggaccgcttcccgaacgtcctcgccatcacggga
ccacagcaatacgagagcgtcgtcggcgccgtgcatcaggccgcgcctccggcccacgat
cccttcgtggatctggtgccgccccagggcgtcaagctgacgccgcggcactacgcctat
ctgaagatttccgagggctgcaacaaccgctgctccttctgcatcatcccgaagctgcgc
ggcgacctggtcagccgccccatcggggacgtgctgcgcgaggccgagaagctggccaag
gccggcgtcaaggagatcctcgtcatctcccaggatacgagcgcctacggcctcgacatc
aagtaccagcccagcctttggcaggaccgagaggtgcgcacgcgcttctacgacctcgcc
cgggaactcggcgaaatgggcctgtggacgcggatgcactacgtctatccctatccgcac
gtggacgaggtcattccgctcatggcggaaggcaagatccttccttacctcgacatccct
ttccagcacgcctcgccgacggtcctgaaggccatgcgccgcccggcccaccaggagaag
accctcgaccggatccgcaagtggcgggaaatctgcccggatctcgccatccgctccacc
ttcatcgtcggtttccccggcgagacggatgaggacgtggattttgtgctcgactggctg
aaggaggccaagctcgaccgggtcggctgcttccgctacgagcccgtccagggcgcaccg
gcgaacgaactggccggagctgtcccccaagaggtgaaggacgagcgctggcatcggttc
atgaagactcagcgcgaggtcagtgcccgcctgcagaaggccaaggtgggcaagcgcctg
ccggtcatcatcgatgagcccggcgccaccgtcgccaaggggcgcacgaaatacgacgcg
cccgagatcgacggcaatgtctatgtcgcctcccgccgccccctgcgggccggagatatc
gtgaccgtcaagatcgagcgctctgacgagtacgacctgcacggcacggcggtctga
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