Microvirga sp. 17 mud 1-3: C4E04_11095
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Entry
C4E04_11095 CDS
T05470
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miv03016
]
C4E04_11095
Enzymes [BR:
miv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
C4E04_11095
Transfer RNA biogenesis [BR:
miv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
C4E04_11095
Prokaryotic type
C4E04_11095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AWM87222
LinkDB
All DBs
Position
2332554..2333549
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AA seq
331 aa
AA seq
DB search
MSWLIQPRLINGPFDDPGLYLDFRFGRRAILFDLGDLGALSARELLRVSHAFVSHAHVDH
FIGFDRLMRLCLHRPGPLHLVGPPGFIDHLEHKLRGYTWNLIDEGSVDFQLHVGEFNGLR
LDRFAVFSARHVFERWEGEPPALPQGVVYADADLRIEAAALDHGIPSLAFGLRETRRVNV
RRGVLDRLGLPKGPWLTEAKKLLRSGAEGAEIEIPGVGRTSLRELKDQVFLVGPGQSLAY
VTDAAPTLGNAEKILSLAARVDQLFIEAVFPEQDRTLAEAALHLTAREAGRLARKAGAKR
LVVFHHSARYIETPDALRREAILAFEGRDEP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctcatccagccgcgccttatcaacggccccttcgacgatccgggcctttat
ctcgatttccgcttcggccgcagggccattctgttcgatctcggcgatctgggcgccctt
tcggcccgggaactcctgcgcgtcagccatgctttcgtgtcccacgcccatgtggaccat
ttcatcgggttcgaccgcctgatgcgcctgtgtctgcatcggcccggcccgctccatctc
gtcggcccgcccggcttcatcgatcatctcgagcacaagctgcgcggctatacgtggaac
ctcatcgacgaaggctccgtggattttcagcttcatgtgggtgagttcaacggccttcgg
ctcgaccgtttcgcagtcttttccgcccggcatgtcttcgagcgttgggagggggagccg
cccgcactgccgcagggcgtcgtctatgcggacgccgatctgcggatcgaggcggccgcc
ctggaccacgggatcccgtccctcgccttcgggctgcgggagacccggcgggtcaatgtc
cggcgcggcgttctcgaccgtctcggcctccccaaggggccctggctgacggaggcgaag
aaactgctgcgcagcggcgcggaaggggctgaaatcgagataccgggcgtcgggcgcacc
tctctgcgggagctgaaggaccaggttttcctcgtcgggcccgggcaatccctcgcctat
gtgacggatgcggcgccgacgcttggcaatgccgaaaagatcctgtccctggcggcccgg
gtggaccagctcttcatcgaggccgtctttccggagcaggaccgcaccctggcggaggcg
gcactccacctgaccgcacgggaggccggccgcctggcgcgcaaggccggcgccaagcgg
ctcgtcgtgtttcatcattcggcccgctacatcgagacgcctgacgccctgcgtcgagag
gccatccttgccttcgagggacgggacgagccctga
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