Microvirga sp. 17 mud 1-3: C4E04_11645
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Entry
C4E04_11645 CDS
T05470
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_11645
Enzymes [BR:
miv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C4E04_11645
DNA repair and recombination proteins [BR:
miv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C4E04_11645
Prokaryotic type
C4E04_11645
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWM89116
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Position
2442848..2444314
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AA seq
488 aa
AA seq
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MTGPALVWFRDDYRLADNPALSAAVESGASLLCFAIIDESSQGLRPIGSAARWWLHGSLH
ALDRSLRGLGSRLVLFRGPAEGVMRRLAETANPSGVFWNRRYQAAEIAIDSAVKADLSGG
GIAVRSFNGRLLHEPWQIQNQAGRPYRVFTPYLRAVAARPITAPLPRPKGLKPGQWPSAA
LESSVSLADLRLEPTHPDWAAPFSAIWCRGEDGARDRLTEFLEEDLGGYAVRRDFPAAEA
TSRLSPHLRFGEISPRQIWHAAKMRGDGSESHVAKFLSEVVWRDFCHQQLYDDPDLATAP
SDPRFEGFRWADGLTSLIAWQKGRTGYPIVDAGMRQLWQAGWMHNRVRMIVGSFLVKHLL
TDWRHGEAWFWDTLLDADAANNAFNWQWIAGSGPDSSPFHRIFNPVTQGEKFDPDGAYIR
AYVPELAGLPAPHIHKPWEAPREILQQAGIVPGKTYPLPIVDHAAARERALDAYRALRAL
QPGSGDSA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgaccggtcctgccctcgtctggtttcgcgacgattaccgcttggccgacaatccggcc
ctgagcgccgccgtcgagagcggagcctccctcctctgcttcgccatcatcgacgaatcg
tcgcagggcctgcgccccatcggctccgccgcccgctggtggctgcacggctcgctccat
gccctcgatcgctccctgcggggtctcggaagccgcctggttctctttcggggcccggcg
gagggggtgatgaggcgccttgccgagaccgcgaatccctcaggcgttttctggaatcgt
cgctatcaggcggccgagattgccatagacagcgccgttaaggcggatctgagcggcggg
ggaatcgccgtccgcagcttcaatgggcgcctcctccacgaaccgtggcagatccagaat
caggccggccggccctatcgggtcttcaccccctatctccgcgccgttgcggcaaggccg
atcaccgcccccctgccccgccctaagggactcaagcccggccaatggccttccgcggct
ctcgaatcgagcgtctccctggcggatctccggctcgagccaacccatccggactgggct
gcgcccttctcggccatctggtgccggggcgaggacggcgcccgtgatcggctgacggaa
ttccttgaggaggatctgggcggctatgccgtccggcgcgattttccggccgcggaagca
acgtcgcgcctgtctccccatctccgcttcggagagatcagcccgcgccagatctggcac
gccgcgaagatgcgcggcgatgggagcgaaagccatgtggcgaagttcctgagcgaggtc
gtctggcgcgacttctgccaccagcagctctatgacgatcccgatctcgcaacggctcca
tccgacccgcgctttgaaggatttcgatgggccgacggtttgacctccctcattgcctgg
cagaaaggccggaccgggtatccgattgtcgatgcagggatgcgtcagctttggcaggca
ggctggatgcacaatcgcgtccggatgatcgtcggatccttcctcgtgaagcatctcctg
accgactggcggcatggggaggcctggttctgggacacgctgctggatgccgacgctgcc
aacaatgccttcaactggcagtggatcgccggctcggggccggattcctcgccattccac
cgcatcttcaatcccgtaacccagggcgagaaattcgatcccgacggggcctatatccgt
gcctatgtgccggaactcgcgggcctgccggccccgcatatccacaagccctgggaggcg
ccgcgcgagatcctgcaacaggcgggaatcgtgcccggcaagacctatcctcttcccata
gtggaccatgctgcagcccgtgagcgcgccctcgacgcataccgggccttgcgcgcattg
cagcccggaagcggcgattcggcttga
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