KEGG   Microvirga sp. 17 mud 1-3: C4E04_12445
Entry
C4E04_12445       CDS       T05470                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
miv  Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:miv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:miv03016]
    C4E04_12445 (rnd)
Enzymes [BR:miv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     C4E04_12445 (rnd)
Transfer RNA biogenesis [BR:miv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C4E04_12445 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AWM87460
UniProt: A0A2Z3IGI9
LinkDB
Position
2599908..2601068
AA seq 386 aa
MDLISTTDALRQACERLAAHPFVTVDTEFLRETTYYPRLCLIQMAGPDPADAVLVDPLAP
DMDLAPFMALMADRNVVKVFHSARQDLEIVWNLGQIVPEPLFDTQVAAMVCGYGDSVSYE
QLANDLAKARIDKSSRFTDWSRRPLTDAQLTYALSDVTHLVKVYEALAAQLEKNGRLAWL
DEEMAILSSPETYQADPENAWKRLAGRLRKSKEVAVLMEVAAWREREAQSRDVPRGRILK
DDALIDLAVSAPRSVEALGRLRTIPNGFERSRTGADILEAVSRGLARDPATVPMPERSRG
RGNTGAVVDLLKVLLKAVAEEEGVAPKIIATVDDLEAIAENDMADVTPLHGWRRALFGEK
ALALKNGQLGLVLERGRVKMREISAP
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggacttgatctctacgacagacgccctccgccaggcctgcgagcgcctcgccgcccat
ccgttcgtgaccgtcgatacggaattcctgcgcgagaccacttattaccccaggctctgc
ctgatccagatggctgggcccgatccggccgacgccgtgctggtcgacccgctggcgccc
gacatggacctggcgcccttcatggccctcatggcggaccggaatgtcgtgaaggtcttt
cactcggcgcgccaggacctggaaatcgtctggaatctcgggcagatcgtgcccgagccc
ctgttcgacacccaggtggccgccatggtgtgcggctacggtgattccgtatcctacgag
cagctcgccaacgacctcgccaaggcgcgtatcgacaagtcctcccgcttcaccgactgg
tcccgccgccccctgacggacgcccagcttacctatgcgctctcggatgtcacccatctg
gtgaaagtctacgaggccctggcggcccagcttgaaaagaacggccggctcgcctggctc
gacgaggagatggcgatcctctcatcgcccgagacctatcaggccgacccggaaaatgcc
tggaaacgcctcgccggacgcctgcgcaagtccaaggaagtggcggtgctcatggaggtg
gcggcctggcgcgagcgtgaggcccagagccgcgacgtgccgcgcgggcgcatcctgaag
gacgatgccctcatcgatctcgccgtatcggctccccgcagcgtggaagccctgggccgc
ctgcgcaccattcccaacggtttcgagcgctcccgcaccggggccgacatcctggaggcg
gtttcccgcggcctcgcccgcgaccccgcgaccgtgcccatgcccgaacgcagccgcggc
cgcggcaatacgggcgccgtggtcgacctcctgaaggtgctgctcaaggcggtcgccgag
gaggagggcgtggcccccaagatcatcgccacggtggacgacctcgaggccatcgccgaa
aacgatatggcggatgttacacccctgcacggatggcgtcgcgccctcttcggcgagaaa
gccctggcgctcaagaacggccagctcggcctcgtgctggagcgggggcgggtgaagatg
cgggagatttcagccccgtaa

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