Microvirga sp. 17 mud 1-3: C4E04_13630
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Entry
C4E04_13630 CDS
T05470
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00521
Streptomycin biosynthesis
miv00523
Polyketide sugar unit biosynthesis
miv00525
Acarbose and validamycin biosynthesis
miv00541
Biosynthesis of various nucleotide sugars
miv01055
Biosynthesis of vancomycin group antibiotics
miv01100
Metabolic pathways
miv01110
Biosynthesis of secondary metabolites
miv01250
Biosynthesis of nucleotide sugars
Module
miv_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C4E04_13630 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C4E04_13630 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C4E04_13630 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C4E04_13630 (rfbB)
00525 Acarbose and validamycin biosynthesis
C4E04_13630 (rfbB)
Enzymes [BR:
miv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C4E04_13630 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Glyco_transf_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AWM87671
UniProt:
A0A2Z3IGG2
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Position
complement(2859428..2860486)
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AA seq
352 aa
AA seq
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MKRFVVTGGAGFIGSAVVRMLLRETPHEVLVIDKLTYAGNLDSLEPVANNPRYRFERADI
ADLDRMRNLIESYRPDVVMHLAAESHVDRSIDGPGEFIKTNIVGTYALLQAVLGYWRALP
GAQRDAFRFHHVSTDEVFGSLREDGLFHEEYPYGPTSPYSASKAASDHLVRAWQCTYGLP
TIVTNCSNNYGPYHFPEKLIPLTILNALEGKSLPVYGRGENVRDWLFVDDHARALILAAE
RASPGETYMIGGYNERKNIDVVRAICDLVDELAPSREIGPRNRLITFVVDRPGHDQRYAI
DASKIERDLGWRPDETFESGLRRTVQWYLDNRRWWERVRSGVYQGERLGIVA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatttgttgttacgggtggcgcaggcttcatcggatccgctgtcgtacgaatg
ctcttgcgcgaaacgccgcacgaggtgctggtcatcgacaagctgacctatgcgggcaat
ctggattctctggagccggtcgccaacaatccgagatatcggttcgagcgggccgatatc
gcagacctcgatcggatgcggaatttgatcgaaagctaccggcccgacgtcgtcatgcat
ctggctgccgagagccatgtggaccggtctatcgatggtccgggcgagttcatcaaaacc
aatattgtaggaacatatgccttactccaggccgttctaggctattggcgcgcgctacca
ggggcacagcgagacgcattccgcttccatcatgtttccacggacgaggtctttggctcc
cttagagaggacggtctcttccatgaggaatatccctatgggccgacctctccctattcg
gcctcaaaggcggcatccgaccatctggtgcgggcttggcaatgcacctacggcttgccg
acgatcgttactaactgctccaacaattacggcccctaccatttccccgagaagctcatc
ccgctgaccattctgaatgccctggagggcaaatcccttccggtttacggacggggcgag
aatgtgcgcgactggcttttcgttgacgatcacgcccgtgcgctgattcttgctgccgag
cgcgcgtctcctggcgagacctacatgatcgggggatataacgagcgaaagaacatcgat
gtggtgcgcgccatttgcgatctggtcgacgagctggctccgagccgggaaattggtcca
cgcaaccgactgatcaccttcgtggttgatcgccctggtcatgaccagcgttatgcgatc
gatgcttccaagatcgagcgcgatctcggctggcgcccggatgagaccttcgagtccggc
ctgcgccgcacggtccaatggtatttggacaatcgcagatggtgggagcgcgtgcgctca
ggagtctatcaaggtgagcggctgggcatcgtagcttga
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