KEGG   Microvirga sp. 17 mud 1-3: C4E04_13630
Entry
C4E04_13630       CDS       T05470                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
miv  Microvirga sp. 17 mud 1-3
Pathway
miv00521  Streptomycin biosynthesis
miv00523  Polyketide sugar unit biosynthesis
miv00525  Acarbose and validamycin biosynthesis
miv00541  Biosynthesis of various nucleotide sugars
miv01055  Biosynthesis of vancomycin group antibiotics
miv01100  Metabolic pathways
miv01110  Biosynthesis of secondary metabolites
miv01250  Biosynthesis of nucleotide sugars
Module
miv_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:miv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    C4E04_13630 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    C4E04_13630 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    C4E04_13630 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    C4E04_13630 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    C4E04_13630 (rfbB)
Enzymes [BR:miv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     C4E04_13630 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 adh_short Sacchrp_dh_NADP KR Glyco_transf_4 NAD_binding_10
Other DBs
NCBI-ProteinID: AWM87671
UniProt: A0A2Z3IGG2
LinkDB
Position
complement(2859428..2860486)
AA seq 352 aa
MKRFVVTGGAGFIGSAVVRMLLRETPHEVLVIDKLTYAGNLDSLEPVANNPRYRFERADI
ADLDRMRNLIESYRPDVVMHLAAESHVDRSIDGPGEFIKTNIVGTYALLQAVLGYWRALP
GAQRDAFRFHHVSTDEVFGSLREDGLFHEEYPYGPTSPYSASKAASDHLVRAWQCTYGLP
TIVTNCSNNYGPYHFPEKLIPLTILNALEGKSLPVYGRGENVRDWLFVDDHARALILAAE
RASPGETYMIGGYNERKNIDVVRAICDLVDELAPSREIGPRNRLITFVVDRPGHDQRYAI
DASKIERDLGWRPDETFESGLRRTVQWYLDNRRWWERVRSGVYQGERLGIVA
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaagcgatttgttgttacgggtggcgcaggcttcatcggatccgctgtcgtacgaatg
ctcttgcgcgaaacgccgcacgaggtgctggtcatcgacaagctgacctatgcgggcaat
ctggattctctggagccggtcgccaacaatccgagatatcggttcgagcgggccgatatc
gcagacctcgatcggatgcggaatttgatcgaaagctaccggcccgacgtcgtcatgcat
ctggctgccgagagccatgtggaccggtctatcgatggtccgggcgagttcatcaaaacc
aatattgtaggaacatatgccttactccaggccgttctaggctattggcgcgcgctacca
ggggcacagcgagacgcattccgcttccatcatgtttccacggacgaggtctttggctcc
cttagagaggacggtctcttccatgaggaatatccctatgggccgacctctccctattcg
gcctcaaaggcggcatccgaccatctggtgcgggcttggcaatgcacctacggcttgccg
acgatcgttactaactgctccaacaattacggcccctaccatttccccgagaagctcatc
ccgctgaccattctgaatgccctggagggcaaatcccttccggtttacggacggggcgag
aatgtgcgcgactggcttttcgttgacgatcacgcccgtgcgctgattcttgctgccgag
cgcgcgtctcctggcgagacctacatgatcgggggatataacgagcgaaagaacatcgat
gtggtgcgcgccatttgcgatctggtcgacgagctggctccgagccgggaaattggtcca
cgcaaccgactgatcaccttcgtggttgatcgccctggtcatgaccagcgttatgcgatc
gatgcttccaagatcgagcgcgatctcggctggcgcccggatgagaccttcgagtccggc
ctgcgccgcacggtccaatggtatttggacaatcgcagatggtgggagcgcgtgcgctca
ggagtctatcaaggtgagcggctgggcatcgtagcttga

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