Microvirga sp. 17 mud 1-3: C4E04_15055
Help
Entry
C4E04_15055 CDS
T05470
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
miv03009
]
C4E04_15055
Enzymes [BR:
miv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
C4E04_15055
Ribosome biogenesis [BR:
miv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C4E04_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWM87926
UniProt:
A0A2Z3IB83
LinkDB
All DBs
Position
complement(3187085..3187825)
Genome browser
AA seq
246 aa
AA seq
DB search
MSKAATLRLDRLLANLGYGSRREVQQLVDAGAVTLDGAIIEEPDQRIAVTRDLPERMQVD
DEPLDPPPGLLLMLNKPLGVTCSHKEAGPLVYGLLPPRWRRRDPALSTVGRLDKETSGLL
LMTDDGTLLHRIISPRSNVSKRYRVTLDRPLRGDEAAIFSSGTLMLDNEDKPLLPAELEV
LSPTEALVTITEGRYHQVRRMFAAVGNHVVALHRDRMGGLTLPDDIAPGEYRIMGEAEIA
QVLPPR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggctgccaccctcaggctcgaccggctgctcgccaatctgggctatggctca
aggcgggaggtgcagcaactcgtggacgcaggggccgtaacccttgacggcgccatcatc
gaggagccggatcagcgcatcgccgtcacgcgcgatctgccggagcggatgcaggtggac
gacgaacctctcgacccgccgcccggcctcttgctgatgctgaacaagccgctcggcgtc
acctgctcgcacaaggaggcgggacccctggtctatggtctgctgccgccccgctggcgc
cgccgcgacccggcgctctccacggtcggccgcctggacaaggaaacgtcgggcctgctg
ctgatgaccgacgacggcaccctgctccaccgcatcatctcgccgcgcagcaacgtctcc
aagcgctatcgcgtcaccctcgaccgtcccctgcggggcgacgaggccgcaatcttctcc
tcagggacgctgatgctcgacaacgaggacaagccgctcctgccggccgaactggaggtg
ctctcgccgacggaggccctcgtgaccatcacggaaggacgctaccatcaggtgcgccgg
atgttcgcagcggtcggcaaccatgtggtcgccctgcaccgggaccgcatgggcggcctc
accctgccggacgatatcgcgccgggggaataccgcatcatgggcgaggccgagatcgcg
caggtcctgccgccccgctga
DBGET
integrated database retrieval system
