Microvirga sp. 17 mud 1-3: C4E04_15230
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Entry
C4E04_15230 CDS
T05470
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03030
DNA replication
miv03430
Mismatch repair
miv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4E04_15230
03430 Mismatch repair
C4E04_15230
03440 Homologous recombination
C4E04_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miv03032
]
C4E04_15230
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_15230
Enzymes [BR:
miv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4E04_15230
DNA replication proteins [BR:
miv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4E04_15230
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4E04_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_14
AAA_18
AAA_5
AAA_assoc_2
SRP54
TsaE
AAA_24
Rad17
AAA_19
SKI
AAA_2
RCF1-5-like_lid
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWM87960
UniProt:
A0A2Z3IIF4
LinkDB
All DBs
Position
3221184..3223010
Genome browser
AA seq
608 aa
AA seq
DB search
MDETTAGTPPNDEPALPGFPSAPAPAASGNGAYRVLARKYRPRTFDDLIGQEAMVRTLSN
AFETGRIPQAWMLTGVRGVGKTTTARILARGLNYQTADGTGGPTIHMPGLGVHCEAIMES
RHVDVLEMDAASHTGIDDVRQIIDGIRYSPVSARYKVYIIDEVHMLSEKAFNAFLKTLEE
PPPHAKFIFATTEIRKVPVTILSRCQRFDLRRIDADKLVAHLGRICDAEGVRAEPEALAA
IARAAEGSARDSLSLLDQAIAHGAGIVKAETVRDMLGLADRTQVIDLFEAVMRGDVPEAF
AGLRTQYDSGADPAVVLSDLAAFAHVVTRLKLIPEAAKDPALSEAERSRGLDFARKLPVR
ALSRAWQILLKGVPEVQASNRPVAAAEMVLVRLAYAADLPTPDEALRALRDGNPLPAGGP
PPSPAPSPSGPVSSGNMALATSQARPQPRLEPQGAPALRLRRFEDVVAMAGEKREIVLKA
ALERDVRLVRFEEGSIELSLAEGGSRTIANDLSRALQQWTGQRWMVALSSEEGAPTLRDQ
ALAAERERREGAASHPLVQAVLAKFPGAQIVNVVERKSEDQASDAETEILGEADAMAAHE
TEADDDLD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaccacagccggcacgcccccgaatgacgagccggccctgccgggctttccc
tctgcgccggcgcccgccgcgtccggcaacggggcttatcgcgtcctcgcccgcaagtac
cgcccccgcaccttcgacgacctgatcggccaggaggccatggtccgcaccctctcgaat
gccttcgagacgggccggatcccacaggcctggatgctcacgggcgtccgcggcgtcggc
aagaccaccacggcccgcatcctggcccggggcctcaactaccagaccgccgacgggacc
ggcggcccgaccatccacatgcctggcctcggcgttcattgcgaggcgatcatggaatcc
cggcacgtggacgtgctggagatggacgccgcctcgcataccggcatcgacgacgtccgc
cagatcatcgacggcatccgctattcgccggtctcggcccgctacaaggtctacatcatc
gacgaggtgcacatgctctccgagaaggcgttcaacgccttcctgaagaccctcgaagag
ccgccgccccacgccaagttcatcttcgccaccaccgagatccgcaaggtcccggtcacc
atcctgtcccgctgccagcgcttcgacctgcgccgcatcgatgccgacaagctcgtggcc
catctcggccgcatctgcgacgccgagggcgtccgggcggagcccgaggcgctcgcggcc
atcgcccgggcggcagagggctcggcccgcgattcgctctcgcttctcgatcaggccatc
gcccacggggccggcatcgtgaaggccgagaccgtgcgcgacatgctgggcctcgccgac
cgcacccaggtcatcgacctgttcgaggcggtcatgcgcggcgacgtgccggaggccttt
gcgggcctgcggacgcaatacgattccggcgccgacccggccgtggtcctctccgacctc
gcggctttcgcgcatgtggtgacacggctgaagctgatccccgaagccgcgaaggacccc
gctttgtccgaggccgagcggagccgggggctcgatttcgcccgtaagcttcccgttcgg
gctctctcccgcgcctggcagatcctgctgaagggcgtcccggaggtgcaggcctccaac
cggccggtcgcggccgccgagatggtgctggtgcgcctcgcctatgcggcggacctgccg
accccggacgaggccctgcgcgccctgcgggacggaaacccgctgcctgcgggcggcccg
cctccgtcgcctgcgccctcgccgtcggggcctgtctcatcggggaacatggcgcttgcc
acctcccaagcccgcccgcagccacggctggagccgcagggggcgcccgcgctccgcctg
cgccgcttcgaggacgtggtcgccatggccggtgagaagcgcgagatcgtgctcaaggcc
gccctcgagcgggacgtgcgcctcgtccgcttcgaggagggcagcatcgaactgagcctc
gccgagggcggcagccgcaccattgccaacgacctttcccgcgcgctccagcaatggacc
ggccagcgctggatggtggccctgtcgtccgaggagggcgcgccgaccctgcgcgatcag
gcccttgcggccgagcgggagcgccgggagggcgccgccagccatccgctggtccaggcg
gtgctcgccaagttcccgggcgcgcagatcgtcaacgtggtcgagcgcaagtccgaggat
caggcatccgacgccgagaccgaaattctcggcgaggcggacgcgatggcggcccacgag
accgaggccgacgacgacctggattga
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