KEGG   Microvirga sp. 17 mud 1-3: C4E04_15260
Entry
C4E04_15260       CDS       T05470                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
miv  Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:miv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:miv03016]
    C4E04_15260
Enzymes [BR:miv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     C4E04_15260
Transfer RNA biogenesis [BR:miv03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C4E04_15260
 Prokaryotic type
    C4E04_15260
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: AWM87966
UniProt: A0A2Z3IBC9
LinkDB
Position
complement(3227054..3227797)
AA seq 247 aa
MPRYKLVVEYDGTPFTGWQHQANGLSVQQAVEEAIARFAGETVRIHCAGRTDSGVHATHQ
VVHVDLAKDWRQDTVRDATNAHLKPAPVSILSAVQVPDTFHARMSAIKRHYVYRILNRRS
PPALEINRAWHVAWPLDAAVMHEAAQTLIGRHDFTTFRAAECQANSPVRTLDRLDVERTG
NEIRIYASARSFLHHQVRSMVGTLERAGAGRWTVDEVRNALDARDRTRCGPMAPSMGLYL
IGVDYPD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgccccgctacaagctcgtcgtcgaatatgacggcacgccattcacgggctggcagcat
caggcgaacgggctgtccgtccagcaggcggtcgaggaggccattgcgcgcttcgccggc
gagacagtgcggatccattgtgcaggccggaccgattccggcgtccatgcgacccatcag
gtggtccatgtggatctcgccaaggactggcggcaggacacggtccgggacgccaccaac
gcccatctgaagcctgcgccagtttccatcctctcggccgtgcaggtgccggacacgttt
catgcgcggatgtccgccatcaagcgccactacgtctatcgcattctcaaccggcgctcc
ccgccggcccttgagatcaaccgggcctggcatgtggcctggcccctcgacgcggccgtg
atgcacgaggctgcccagaccctgatcgggcggcacgacttcaccaccttcagggccgcc
gagtgccaggcgaacagcccggtcaggacccttgaccgcctcgatgtggagcggaccggg
aacgagatccggatctatgcctccgcccgctcgttcctgcaccaccaggtccgttccatg
gtcggaaccctggaacgggccggtgccggacgctggacggtggacgaggttcgcaatgcc
ctcgatgctcgggacaggacccgctgtgggcccatggcgccttccatgggcctctacctg
atcggcgtcgattacccggactga

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