Microvirga sp. 17 mud 1-3: C4E04_16415
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Entry
C4E04_16415 CDS
T05470
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00550
Peptidoglycan biosynthesis
miv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4E04_16415 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
miv01003
]
C4E04_16415 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
miv01011
]
C4E04_16415 (pbpC)
Enzymes [BR:
miv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C4E04_16415 (pbpC)
Glycosyltransferases [BR:
miv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C4E04_16415 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
miv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C4E04_16415 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
AWM88171
LinkDB
All DBs
Position
complement(3479984..3482095)
Genome browser
AA seq
703 aa
AA seq
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MRAGGTRLSRAGRRIAAGLAAVAVTAGLALWGYAESLGPVDMSVAEMRSTVVLDRDGRLL
RPFVTEEGRWRLPITTADVDPHYLSMLAAYEDARFEKHIGVDPLAMLRAAAQFVRNGAVV
SGGSTLTMQVARLLEPREERSLSAKLRQMVRAIQLERRLTKDQILTLYLTLAPYGGNLEG
ARAASLSYFGREPKRLSFAEAALLVALPQAPEIRRPDRDPQAARRARDRVLDRARARGVI
GAAEAEAAKAEPVPKRRHAFPMLAAHAAEQAVADRPAEKMQRLALDGRLQANLERLARER
IERFDARLSLAIVVIHNATGEIRAQVGSPDYMSRERAGAIDMTRALRSPGSALKPVIYAL
AFESGLAHPETLLDDRPSRYGAYQPENFDLGFQGTVTARRALQLSLNVPAVELLNALGPA
RLLARLNQAGTGVAMPKEAAPGLAIGLGGLGITLTDLTRIFAGLARGGEVPDLVRRIGEP
APSDTLRRITDPVSAWYVFDILRGAPPPDNALAGRIAFKTGTSYGYRDAWAVGYDRNYTI
GVWIGRPDGSAVPGLVGRMAAAPILFDAYGRLGAEPEALPIPPFALQATTATLPPPLRHV
RQDVPKTLASTVQAPLRITFPLDGSRVDLGFAGEADEHGSLALKASGGVPPLTWLVDGAP
VEGGRDGRSVRRETFWQPPGAGFVRLSVIDAKGATDSVVVRVE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggcggcacacggctgtcccgggccggccgccgcatcgcggccgggctggcg
gccgttgccgtgacggcggggctcgccctctggggctatgcggagagcctcggccccgtg
gatatgagcgtcgccgagatgcgctcgaccgtcgtcctcgaccgtgacgggcggcttctg
cggcccttcgtgaccgaggaggggcgctggcgcctgcccatcacgacggcggatgtggac
ccgcattacctgtccatgctcgcggcctatgaggatgcgcggttcgagaaacatatcggc
gtcgatccgctcgccatgctgagagcggccgcccagttcgtgcgcaacggcgccgtcgtg
tccggcggttccactctcaccatgcaggtggcacgccttctggagccgcgcgaggagcgg
agcctgagcgcgaaattgcgccagatggtgcgggcgatccagctcgagcgccggctcacc
aaggaccagatcctcaccctttacctcacccttgcgccttatggcggaaacctggagggc
gcgcgggccgcgagcctgtcctatttcgggcgtgagccgaagcgcctgtccttcgcggag
gcggcgctcctcgtggcgctgccgcaggctcccgaaatacgacgcccggaccgggatccg
caggccgcccgccgggcgcgggaccgggttctcgacagggcccgtgcccgcggcgtcatc
ggggccgcggaggccgaggccgcgaaggcggagccggttccgaagcggcgtcacgccttc
ccgatgctggccgcgcatgcggccgagcaggcggtggccgaccggcctgccgagaagatg
caacggcttgccctggacggacgcctccaggcgaatttggagcgcctcgcgcgggagcgg
atcgagcggttcgacgcgcgcctgtccctcgccatcgtggtgatccacaacgccaccggc
gagatccgcgcgcaggtcggcagcccggattacatgagccgcgagcgggcgggcgccatc
gacatgacgcgggccctgcgctctccgggctcggccctgaagccggtcatctatgcgctc
gccttcgagagcggactcgcgcatcccgagacgctgctcgacgacaggccttcgcgctat
ggcgcgtaccaaccggagaatttcgatctcggcttccagggcaccgtgacggcgcggcgg
gcgctccagctctccctcaacgtgccggcggtcgagctcctgaatgcgctcggcccggcc
cgccttctggcgcggctgaaccaggccgggacaggcgtcgcgatgccgaaggaggccgcg
cccggcctcgccatcggcctcggcggcctcggcatcacgctcacggacctcacgcggatc
ttcgcggggctcgcccggggcggggaggtgccggatcttgtgcggcgcatcggcgaacct
gctccgtccgacacgctccgccggatcaccgatccggtctcggcctggtatgtcttcgac
atcctgcgcggcgcgccgccgccggacaatgcgcttgcggggcgcatcgcattcaagacc
ggcacgtcctacggctatcgcgacgcctgggcggtgggatacgaccgcaactacaccatc
ggcgtctggatcggccggcccgacggaagcgccgttccgggccttgtcgggcgcatggcg
gccgcgccgatcctgttcgatgcctatggtcgcctcggggcagagccggaagcgctgccc
ataccgcccttcgcgctccaggcgaccaccgcaaccctgccgccgcccctgcgccatgtg
cgccaggatgtgcccaagaccctcgcgtcgaccgtgcaggcgcccctcaggatcacgttt
ccactcgacggctcgcgggtcgatctcggcttcgcgggtgaggccgacgagcacgggagc
ctggccctcaaggcctccggcggcgtgccgccgctgacctggctggtggacggagcgccg
gtcgagggtgggcgggacgggcgctccgtgcgccgggagacgttctggcagccgccgggc
gcgggcttcgtgcgcctgtcggtgatcgacgcgaagggcgcgaccgacagcgtcgtcgtg
cgcgtggagtga
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