Microvirga sp. 17 mud 1-3: C4E04_16920
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Entry
C4E04_16920 CDS
T05470
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00860
Porphyrin metabolism
miv01100
Metabolic pathways
miv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
C4E04_16920 (cobD)
Enzymes [BR:
miv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
C4E04_16920 (cobD)
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Gene cluster
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
AWM88258
UniProt:
A0A2Z3I8M0
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All DBs
Position
complement(3598198..3599169)
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AA seq
323 aa
AA seq
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MLSGLPVLLTALTADACFGYPAWLFARIRHPVTWIGRMIAALEQRLNDPARSASVRRSRG
VATLAATVGAVALVAAGIEAAFRIALGGWAFLPVGLLAGSLIAQRSLHDHVARVAEGLDR
SLAEGRAAVAHIVGRDPQSLDEPAVARAAIESLAENFSDGVVAPAFYTALAGLAGGAAYK
AVNTADSMVGHRTPRHEAYGWAAARLDDGINLPASRLSAGLLVLAAAIVPGCSATGAARA
VLRDARRHRSPNAGWPEAAMAGALSLRLAGPRTYGGVTVPDHWMGDGTPAATPGDIRRAL
SVYRIACLLQAGLWALLLTILAV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctctctggactccccgtccttctgacggccctcacggccgatgcctgcttcggctat
ccggcctggctcttcgcgcgcatcaggcatccggtcacctggatcggccggatgatcgcc
gccctggagcagcgcctcaacgatccggcccgttccgcatccgtccggcgcagtcgcggg
gtcgcgacattggccgcaaccgtcggggccgtggcccttgtcgcggccggaatagaggcc
gctttccgcatcgctctcggcggatgggccttccttccggtcggccttctcgcaggcagc
ctgatcgcccagcgcagcctgcacgaccatgtcgcccgcgtggccgaagggctcgaccgg
agccttgccgagggccgggccgcggtcgcccatatcgtcgggcgggatccgcaatccctc
gacgagccggccgtggcacgggcggccatcgagagcctggccgagaacttctcggacggg
gtggtcgctcccgccttctacacggcgctggccgggcttgcgggcggcgccgcctacaag
gccgtcaacacggcggacagcatggtcggtcaccggacgccgcgccacgaggcctatggc
tgggcggcggcgcggctcgatgatgggatcaaccttccggcctcgcggctctccgccggc
ctcctggtcctggcggccgccatcgttcccggatgcagcgcgaccggagccgcccgggcg
gtgctccgggatgcgcgccgccatcgctcccccaatgcgggttggccggaggcggccatg
gcgggtgccctgtcgctgcgcctcgcaggaccccggacctatggcggcgtgaccgtcccc
gaccattggatgggagacggcacgcctgccgcgacgcccggcgacatccgccgggcgctg
agtgtctaccggatcgcctgcctgctgcaggcaggcctgtgggccctcctgctgacgatc
ctggccgtgtga
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