Microvirga sp. 17 mud 1-3: C4E04_17175
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Entry
C4E04_17175 CDS
T05470
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4E04_17175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_17175
Enzymes [BR:
miv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4E04_17175
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4E04_17175
RecFOR pathway proteins
C4E04_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_22
AAA_14
AAA_17
AAA_16
AAA_2
AAA_18
nSTAND3
DUF815
Rad17
ResIII
AAA_33
NTPase_1
RNA_helicase
TsaE
NB-ARC
MCM
AAA_28
ABC_tran
IstB_IS21
NACHT
AAA_24
AAA_7
Sigma54_activ_2
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AWM88302
UniProt:
A0A2Z3IGE6
LinkDB
All DBs
Position
complement(3653563..3654609)
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AA seq
348 aa
AA seq
DB search
MTDSRRLLSPEKREDDVEASIRPLSLDDFTGQKAARANLQVFINAAKSRGDALDHVLFVG
PPGLGKTTLAQIVARELGVNFRSTSGPVIAKAGDLAAQLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDYQLDLIIGEGPAARSVKIELPKFTLVGATTRAGLLTTPLRDRFGIPIRLE
FYTVDELELIVRRGARVMGLSMSEEGANEIARRSRGTPRIAGRLLRRVRDFAIVEGAEIV
SRELADRSLRLLDVDPIGLDLMDRKYLTMVAQSFGGGPVGIETIAAALSEPRDAIEDIIE
PYLIQKGFVQRTPRGRVLTPHAFRHLGLAEPTRETAAQFGLFNGADDE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattcacgccgcctgctcagccctgaaaagcgcgaggacgatgtcgaggcgtcg
atccggccgctgtcgctcgacgatttcacgggccagaaggccgcgcgggcgaacctccaa
gtcttcatcaacgccgcgaagtcccggggcgatgccctcgatcacgtgctcttcgtcggc
cctccggggctcggcaagacgacgctcgcacagatcgtcgcccgggagctgggcgtcaat
ttccgctcgacctccggcccggtcatcgccaaggccggggacctcgcggcccagctcacc
aatctcgaagagcgggacgtgctcttcatcgacgagatccaccggctcaacccggccgtg
gaggagatcctctatccggccatggaggattaccagctcgacctgatcatcggcgaaggc
ccggcggcccgttctgtgaagatcgagctgccgaaattcaccctggtcggcgccaccacc
cgcgcgggcctgctcaccacgcccctgcgcgaccgtttcggcatcccgatccggctcgaa
ttctatacggtcgacgagcttgagctcatcgtccggcgcggcgcccgggtgatgggcctg
agcatgagcgaggagggcgcgaacgagatcgcccgtcgctcccgcggcacgccgcgcatc
gccggccgcctgctgcgccgcgtgcgcgacttcgccatcgtcgagggggccgagatcgtg
tcccgcgagctggcggaccggtccctgcgcctcctcgacgtcgatcccatcgggctcgac
ctcatggaccgcaagtacctgaccatggtcgcccagtccttcggcggcgggcccgtgggc
atcgagaccatcgcggcggcactttccgagccccgcgacgccatcgaggacatcatcgag
ccctaccttatccagaaaggcttcgtgcagcgcaccccgcgcgggcgcgtcctgacaccc
cacgccttccggcatctcggcctcgccgagcccacccgggagaccgccgcccagttcggg
ctgttcaacggggccgacgatgaatga
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