KEGG   Microvirga sp. 17 mud 1-3: C4E04_17395
Entry
C4E04_17395       CDS       T05470                                 
Name
(GenBank) murein L,D-transpeptidase
  KO
K21470  L,D-transpeptidase YcbB
Organism
miv  Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:miv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:miv01002]
    C4E04_17395
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:miv01011]
    C4E04_17395
Peptidases and inhibitors [BR:miv01002]
 Cysteine peptidases
  Family C82
   C4E04_17395
Peptidoglycan biosynthesis and degradation proteins [BR:miv01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   C4E04_17395
SSDB
Motif
Pfam: Scaffold YkuD PG_binding_1 LtuA
Other DBs
NCBI-ProteinID: AWM88341
UniProt: A0A2Z3IIP1
LinkDB
Position
3693638..3695398
AA seq 586 aa
MLSLRKTALWLGLVGSVSLASLSAFAAEKEIGLPQPALPLPAIEPAEPSFADVTVPAAPR
DVALPEPPPAAPVVLDTAETVAPLPEIPLPDPAPVLATARADWLRVALEERLASDTLLRD
LRLRQADRESLSAFYAKAEHPLAFVRDGAFTAAARAAVTRLKAADEDGLDPTDYPVPDLR
LAREASPAQWAEADLKLAAAVIRYARDARGGRLDPSRISPLITPKLDLPEAAEVLAQVAN
AADANAALEAYNPPHEGYRALKEKLAKLRASHPSSPPRLKVPKGPTLRVGMRDERVPLIR
ARFNLAKEPEDRTVYDDRLASAVAAFQKEKGLADDGVLGPATLAALSGPSVAHMESEIIA
NMERWRWLPSDLGERHIMVNVPEFRLRLVDGDSIIHQTRVIVGKEKSQTPIFSENMKYLV
VNPSWTVPPSILKKEFLPALANDPYYAAKKGYKVIRKGNRITVQQPPGERNALGYIKFMF
PNQHAVYLHDTPNRNLFGAGKRAFSHGCVRVDQPFQLAEEVLGEKWSEARLKGLIGKGER
YLNLSRPLPVHLTYFTLSVDEKGEVKTFNDLYGFDLKVREALGLRS
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgcttagcctgcgcaagacggcactgtggctcggcctggtcggctcggtgtctctggcc
tccctgtccgccttcgcggcggaaaaagagatcggcctgccgcagccggcgcttccgctc
cccgccatcgagcccgcggagccgtccttcgcggatgtgacggtcccggccgccccccgc
gacgtcgccctccccgagccgcccccggccgctcccgtcgtcctcgacaccgccgagacg
gtcgcgccccttccggaaatcccgctcccggatccggcgcccgtcctggcgaccgcccgt
gcggactggctgcgggtcgccctggaggagcggctggcctccgacacgctcctgcgtgac
ctgcgcctgaggcaggccgacagggagtccctgtcggctttctacgcgaaggccgagcat
cccctggccttcgtccgcgacggcgctttcacggcggccgcgcgggcagccgtcacacgc
ctgaaggccgccgacgaggacgggctcgacccgaccgattatccggtgccggacctacgc
ctcgcccgtgaggcctcgccggcgcaatgggcggaggcggacctgaaactggctgccgcc
gtcatccgctatgcccgcgacgcgcggggcgggcgcctcgacccctcgcggatctctccg
ctcatcacgccgaagctcgacctgcccgaggccgccgaagtgctggcccaggtagcgaac
gcggccgacgcgaatgcggcgctcgaagcctacaacccgccccatgagggctatcgggcc
ctgaaggagaagctcgccaagctccgcgccagtcatccctcctcaccgccgcgcctgaag
gtgccgaaggggccgaccctgcgggtaggcatgcgtgacgagcgcgtgccgctgatccgg
gcgcgcttcaacctcgccaaggagccggaggacaggaccgtctacgacgatcgcctcgcc
tccgcggttgcggccttccagaaggagaagggcctggcggacgacggcgtgctcggcccg
gcaaccctcgcggccctttcgggcccctccgtggctcacatggagagcgagatcatcgcc
aacatggagcgctggcgctggctgccgagcgatctcggtgagcgccacatcatggtgaac
gtgccggaattccgcctgcggctcgtggacggcgattccatcattcaccagacaagggtg
atcgtcggcaaggagaagtcccagacgccgatcttctccgagaacatgaagtacctggtc
gtcaacccgtcctggaccgttccgccctcgatcctgaagaaggagttcctgccggcgctc
gccaacgacccctattacgccgcgaagaagggctacaaggtcatccgcaagggcaaccgg
atcacggtccagcagcccccgggcgagcgcaacgcactgggctacatcaagttcatgttc
ccgaaccagcacgcggtctatctgcacgacacgccgaaccggaatctgttcggcgccggc
aagcgcgccttcagccatggctgcgtgcgcgtcgaccagcccttccagctggccgaggag
gtgctcggcgagaaatggtcggaggcgcggctcaagggcctgatcggcaagggtgaacgc
tatctcaacctcagccgcccgctgcccgtccacctcacgtatttcaccctttcggtggac
gagaagggcgaggtgaagaccttcaacgacctctacggcttcgatctcaaggtgcgcgag
gctttgggcctgcggtcctga

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