Microvirga sp. 17 mud 1-3: C4E04_17395
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Entry
C4E04_17395 CDS
T05470
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
miv01002
]
C4E04_17395
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
miv01011
]
C4E04_17395
Peptidases and inhibitors [BR:
miv01002
]
Cysteine peptidases
Family C82
C4E04_17395
Peptidoglycan biosynthesis and degradation proteins [BR:
miv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C4E04_17395
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
LtuA
Motif
Other DBs
NCBI-ProteinID:
AWM88341
UniProt:
A0A2Z3IIP1
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Position
3693638..3695398
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AA seq
586 aa
AA seq
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MLSLRKTALWLGLVGSVSLASLSAFAAEKEIGLPQPALPLPAIEPAEPSFADVTVPAAPR
DVALPEPPPAAPVVLDTAETVAPLPEIPLPDPAPVLATARADWLRVALEERLASDTLLRD
LRLRQADRESLSAFYAKAEHPLAFVRDGAFTAAARAAVTRLKAADEDGLDPTDYPVPDLR
LAREASPAQWAEADLKLAAAVIRYARDARGGRLDPSRISPLITPKLDLPEAAEVLAQVAN
AADANAALEAYNPPHEGYRALKEKLAKLRASHPSSPPRLKVPKGPTLRVGMRDERVPLIR
ARFNLAKEPEDRTVYDDRLASAVAAFQKEKGLADDGVLGPATLAALSGPSVAHMESEIIA
NMERWRWLPSDLGERHIMVNVPEFRLRLVDGDSIIHQTRVIVGKEKSQTPIFSENMKYLV
VNPSWTVPPSILKKEFLPALANDPYYAAKKGYKVIRKGNRITVQQPPGERNALGYIKFMF
PNQHAVYLHDTPNRNLFGAGKRAFSHGCVRVDQPFQLAEEVLGEKWSEARLKGLIGKGER
YLNLSRPLPVHLTYFTLSVDEKGEVKTFNDLYGFDLKVREALGLRS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcctgcgcaagacggcactgtggctcggcctggtcggctcggtgtctctggcc
tccctgtccgccttcgcggcggaaaaagagatcggcctgccgcagccggcgcttccgctc
cccgccatcgagcccgcggagccgtccttcgcggatgtgacggtcccggccgccccccgc
gacgtcgccctccccgagccgcccccggccgctcccgtcgtcctcgacaccgccgagacg
gtcgcgccccttccggaaatcccgctcccggatccggcgcccgtcctggcgaccgcccgt
gcggactggctgcgggtcgccctggaggagcggctggcctccgacacgctcctgcgtgac
ctgcgcctgaggcaggccgacagggagtccctgtcggctttctacgcgaaggccgagcat
cccctggccttcgtccgcgacggcgctttcacggcggccgcgcgggcagccgtcacacgc
ctgaaggccgccgacgaggacgggctcgacccgaccgattatccggtgccggacctacgc
ctcgcccgtgaggcctcgccggcgcaatgggcggaggcggacctgaaactggctgccgcc
gtcatccgctatgcccgcgacgcgcggggcgggcgcctcgacccctcgcggatctctccg
ctcatcacgccgaagctcgacctgcccgaggccgccgaagtgctggcccaggtagcgaac
gcggccgacgcgaatgcggcgctcgaagcctacaacccgccccatgagggctatcgggcc
ctgaaggagaagctcgccaagctccgcgccagtcatccctcctcaccgccgcgcctgaag
gtgccgaaggggccgaccctgcgggtaggcatgcgtgacgagcgcgtgccgctgatccgg
gcgcgcttcaacctcgccaaggagccggaggacaggaccgtctacgacgatcgcctcgcc
tccgcggttgcggccttccagaaggagaagggcctggcggacgacggcgtgctcggcccg
gcaaccctcgcggccctttcgggcccctccgtggctcacatggagagcgagatcatcgcc
aacatggagcgctggcgctggctgccgagcgatctcggtgagcgccacatcatggtgaac
gtgccggaattccgcctgcggctcgtggacggcgattccatcattcaccagacaagggtg
atcgtcggcaaggagaagtcccagacgccgatcttctccgagaacatgaagtacctggtc
gtcaacccgtcctggaccgttccgccctcgatcctgaagaaggagttcctgccggcgctc
gccaacgacccctattacgccgcgaagaagggctacaaggtcatccgcaagggcaaccgg
atcacggtccagcagcccccgggcgagcgcaacgcactgggctacatcaagttcatgttc
ccgaaccagcacgcggtctatctgcacgacacgccgaaccggaatctgttcggcgccggc
aagcgcgccttcagccatggctgcgtgcgcgtcgaccagcccttccagctggccgaggag
gtgctcggcgagaaatggtcggaggcgcggctcaagggcctgatcggcaagggtgaacgc
tatctcaacctcagccgcccgctgcccgtccacctcacgtatttcaccctttcggtggac
gagaagggcgaggtgaagaccttcaacgacctctacggcttcgatctcaaggtgcgcgag
gctttgggcctgcggtcctga
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