Microvirga sp. 17 mud 1-3: C4E04_17560
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Entry
C4E04_17560 CDS
T05470
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4E04_17560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_17560
Enzymes [BR:
miv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C4E04_17560
DNA repair and recombination proteins [BR:
miv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4E04_17560
Prokaryotic type
C4E04_17560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF8307
Motif
Other DBs
NCBI-ProteinID:
AWM88366
LinkDB
All DBs
Position
3732304..3733008
Genome browser
AA seq
234 aa
AA seq
DB search
MTGPVSEALAAFRADPRAASWLSLPFFANRRADAIAAEIDDAVAKGAHVLPPPEKVFASL
LLTPLESVKVVILGQDPYPTPGDAHGLAFSYAGTRRFPASLRTILAEMAEDLGVPMPRSG
DLTRWAEQGVLLLNTALTVEAGKAGAHLKLGWSALVDDAVTAISRRRSAVVFLLWGAKAR
ERAALVDADKHLLIEAGHPSPLNRQRDFRGTKPFSRANAWLASKGLAPIEWRLD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcccgtcagcgaagcccttgcggccttccgcgccgatccgcgggccgcctcc
tggctttccctgccgttcttcgcaaataggcgggccgacgccatcgcggccgaaatcgac
gacgccgtcgctaaaggcgcccatgtgctgccgccgcccgaaaaggtcttcgccagcctc
ctcctcacgcccctggagagcgtcaaggtcgtcatcctgggccaggacccctatcccacg
cccggcgacgcacacggcctcgccttctcgtatgccggaacgcgccggttcccggcgtcg
ctcaggacgatcctggccgagatggcggaggatctcggcgtacccatgccgcgaagcgga
gacctgacccgctgggccgagcagggcgtgctcctcctcaacacggcgctcacggtcgag
gccggcaaggcgggggcacatctgaagctcggttggtcggcgctcgtggacgatgcggtt
acggccatctcccggcgccggagcgccgtggtcttcctgctctggggcgccaaggcgcgg
gagcgcgccgcattggtggatgcggacaagcacctgctgatcgaggcaggccatccctcc
ccgctcaatcgccagcgcgatttcagggggacgaagcctttcagtcgcgccaatgcctgg
cttgcctcgaagggtctcgctccgatcgagtggcggctcgattga
DBGET
integrated database retrieval system
