Microvirga sp. 17 mud 1-3: C4E04_18235
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Entry
C4E04_18235 CDS
T05470
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4E04_18235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miv03019
]
C4E04_18235
Messenger RNA biogenesis [BR:
miv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C4E04_18235
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AWM88475
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Position
complement(3874056..3874592)
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AA seq
178 aa
AA seq
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MRGARGLQARTELPYRACVGVMLLNRQGRVFIGRRRSDGGGDQVSDGYAWQMPQGGIDPG
EEPLQAALRELYEETSVSSVTLLAEAPQWYSYDLPSMVAGRAWRGRYRGQNQKWFAFRFE
GDESEINIHRPGGGRHKPEFDEWRWEDMRRLPELIIPFKRPVYENVVGVFGHLKAAGA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgccagaggattacaggccagaaccgagcttccctatcgtgcctgtgtcgga
gtcatgcttctcaaccgccagggccgcgtcttcatcggtcgccgccggtcggacgggggc
ggagaccaggtctccgacggctatgcctggcaaatgccccagggcggtatcgaccctggc
gaggagccccttcaggctgctctgcgcgaactttacgaagagacgagcgtgagctccgtg
acgctcctggccgaagcgccacaatggtattcctatgacctgccctccatggtcgccggc
cgtgcctggcgcggccgctaccggggccagaaccagaagtggttcgctttccgcttcgaa
ggcgacgagagcgagatcaatatccatcgccccggcggcggccgtcacaagccggaattc
gatgaatggcgctgggaggatatgcgccggctgccggagctgatcatcccgttcaaacgg
ccggtctacgagaacgtcgtaggcgtcttcggccacctcaaggcggcgggtgcatag
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