Microvirga sp. 17 mud 1-3: C4E04_18475
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Entry
C4E04_18475 CDS
T05470
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
miv03000
]
C4E04_18475
Transcription factors [BR:
miv03000
]
Prokaryotic type
Helix-turn-helix
LacI family
C4E04_18475
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
RapZ-like_N
ClpB_D2-small
Motif
Other DBs
NCBI-ProteinID:
AWM88515
UniProt:
A0A2Z3IPL7
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Position
complement(3930359..3931615)
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AA seq
418 aa
AA seq
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MVGECMAFLRIDTRILFRDARQGVLLRRYARARCNRLHKLYRKAGFCQTEAEEALGMDET
AKKRSVERRTHPPRAVRIQDVAKLAEVSTATVSRVLAMPQRVSAEKRARVLEAIAKTGYT
PNLTARSLRSQKTGMVLVVLPDLANTFFSRILRGIEEILFEAGYGMIIGGLDGSPEKEAH
FAAFTAAGRVDGAILLNGHLFGQSQDGQGAAAEIDIPVVALCEAIPKADIPQIEIDNRAA
ARRMTEYLAGLGHRQILYVSGPKGNVLEQERFKGYCDGLDKAELPFDSSLVVAGDYTIES
GVHAGQMVVASPRRPTAVFCTSDEMAIGLMRTLLSAGIRVPQDISVAGFDDIEFAAVAEP
ALTTIRQPRQELGRAAASVLVALLEKREAPQRIRLETELVVRDSVAGPRPPATGSSLG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggtgagtgcatggctttcctccggatcgatacccgcatcctcttccgggatgct
cggcagggcgtgctcctgcgacggtatgcaagagcgcgatgtaatcgattacataaactt
taccgcaaagccggcttctgtcaaacagaggctgaagaggccctcgggatggatgagacc
gcaaagaaacgcagcgtggaacgccggacccatccgccccgtgcggtccgtatccaggat
gtagcaaaacttgccgaggtttcgaccgcaacggtgagcagagttctggctatgcctcag
cgagtctcagctgagaaaagggcccgtgtcctcgaggcgattgccaagacgggctacacg
ccgaacctgacggcgcgctccctccgctcccaaaagaccggcatggttttggtagtactg
ccggatctcgccaataccttcttctcccgcatccttaggggaatcgaagagatccttttt
gaggccggctacggaatgatcatcggaggccttgatggctctcccgaaaaggaagcacat
tttgcggccttcacggctgccgggcgtgtcgacggagcgatcctcctgaacggtcatctc
ttcggccaaagccaggacggtcagggcgctgctgcggagatcgacattcccgtagtggct
ctctgcgaagcaatccctaaggcggacatcccgcaaatcgagatcgacaatcgtgcggcg
gcgcggcggatgaccgaatatcttgcgggactgggacaccggcagattctctatgtgagc
ggccccaagggcaacgttcttgagcaggagcgcttcaagggctactgcgacgggttagac
aaggctgaactcccgttcgattcctctcttgttgtggcgggggactacaccatcgagtct
ggcgtccatgccggccagatggtcgtagcgagcccccgccgccccaccgccgtgttctgc
accagtgacgagatggcaatcggcctgatgcggacactcctgtccgcaggcatccgtgtc
ccgcaagacatctctgtcgcgggctttgacgatatcgaattcgcggctgtggccgagccg
gcactgacgacgatccgccagcctcgccaggaactgggacgtgctgcggcatcggtgctc
gtagctctcctcgagaagcgtgaagcaccccagcgcatccggctcgaaaccgagctcgtc
gttcgtgacagcgtcgcggggccgcggcctcctgcaaccgggtcgtctctcggctga
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