Microvirga sp. 17 mud 1-3: C4E04_19540
Help
Entry
C4E04_19540 CDS
T05470
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miv03032
]
C4E04_19540 (ihfB)
03036 Chromosome and associated proteins [BR:
miv03036
]
C4E04_19540 (ihfB)
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_19540 (ihfB)
DNA replication proteins [BR:
miv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C4E04_19540 (ihfB)
Chromosome and associated proteins [BR:
miv03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C4E04_19540 (ihfB)
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C4E04_19540 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AWM88704
UniProt:
A0A2Z3IAB6
LinkDB
All DBs
Position
complement(4164458..4164769)
Genome browser
AA seq
103 aa
AA seq
DB search
MIKSELVLKLAEQNPHLYQRDVENIVNAILDTIADALARGDRVELRGFGAFSVKRRDART
GRNPRTGESVEISEKVVPVFKTGKEMRQRLNPAPKPLKTAVAQ
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactggtgctcaagctcgccgagcagaacccgcatctgtatcagcgc
gacgtcgagaacatcgtgaacgcgatcctcgacacgatcgccgatgccctggcgcggggg
gatcgggtcgagctgcgcggcttcggggccttctcggtgaagcggcgggatgcgcgcacc
ggccgcaatccccgcacgggcgaatcggtcgagatctccgagaaggtcgtgcccgtcttc
aagaccggcaaggagatgcgccagcgcctcaatcccgccccgaaacctctcaagaccgcc
gtcgcgcaatag
DBGET
integrated database retrieval system
