Microvirga sp. 17 mud 1-3: C4E04_19615
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Entry
C4E04_19615 CDS
T05470
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miv03016
]
C4E04_19615 (thpR)
Enzymes [BR:
miv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C4E04_19615 (thpR)
Transfer RNA biogenesis [BR:
miv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C4E04_19615 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AWM88715
UniProt:
A0A2Z3IQB3
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All DBs
Position
4183725..4184261
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGLMLSAYRGGLPGARWVDPENYHITLRFIGDIDERTAQDVLSVLGE
GRRRAPITVTLEGLDSFGGDRPRVIFARASASPDMSDLQSEHERLVRRVGLPPEKRRFTP
HVTLARLRDASPLAVADYFAARSPFQKLTFTAPRFVLFSSRNTVGGGPYVVEAAYPLG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgttcaccggcctcgagatcccggccgagatcggcctgatgctgtccgcc
taccgaggcggcctgccgggggcgcgctgggtcgatcccgagaattaccacatcaccctt
cggttcatcggggacatcgacgagcggaccgcgcaggatgtcctgtcggtcctcggcgag
ggccggcggcgggcgccgatcaccgtcacgctcgaaggtctcgacagtttcggcggcgac
cggccacgggtgatcttcgcccgcgcctccgcctcgccggacatgagcgatctgcaatcg
gagcacgagcgcctggtgcgccgggtcgggctgccgccggaaaagcgccggttcacgccg
catgtgaccctggcgcgtctgcgcgatgcctcgcccctcgccgtggcggattacttcgcg
gcccgcagcccgtttcagaagctcaccttcacggcaccgcgcttcgtgctgttctcctcg
cggaacacggtcggcggcggaccctatgtggtcgaggccgcctatccgctgggatag
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