Microvirga sp. 17 mud 1-3: C4E04_20075
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Entry
C4E04_20075 CDS
T05470
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00300
Lysine biosynthesis
miv00470
D-Amino acid metabolism
miv01100
Metabolic pathways
miv01110
Biosynthesis of secondary metabolites
miv01120
Microbial metabolism in diverse environments
miv01230
Biosynthesis of amino acids
Module
miv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4E04_20075
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4E04_20075
Enzymes [BR:
miv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C4E04_20075
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AWM89273
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Position
complement(4273465..4274346)
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AA seq
293 aa
AA seq
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MSALANHRFLKMNGLGNEITVLDLRGSPLRVSAAEARAIAADPRSRFDQLMVLHDPVTPG
TDAYLRIYNTDGSESGACGNGTRCVAWAMTADSVMGSPADRLVLETRAGLLPTERVSERV
FTVDMGPPRLAWNEIPLSRAFPDTRAIAVETVLPEAPELAGPSAVSMGNPHAIFWVTDAD
SYDLTAIGPKFEHDPVFPERANISLAQVVGSDRIVLRVWERGAGLTRACGSAACATLVAA
SRKGLTGRKAAVSLPGGDLLIAWREGDDHVLMTGPTELEHEGTFAPSLFAGAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccttgcgaaccaccgtttcctgaagatgaacggcctcggcaacgagatcacc
gtgctcgacctgcgcggcagccccctgcgcgtcagtgccgcggaggcgcgcgccatcgcg
gccgatccccgctcgcgcttcgaccagctgatggtcctgcacgatcccgtcacgcccggc
acggacgcctatctgcgcatctacaacacggacggttcggaatccggcgcctgcggcaac
ggcacccgctgcgtcgcctgggccatgacggccgattcggtcatgggatcgcccgctgac
cggctcgtcctggaaaccagagccgggctcctgccgacggagcgcgtctccgaacgggtc
ttcacggtcgatatgggcccgccgcggctcgcctggaacgagattcccttgagccgcgcc
ttcccggacacccgcgccatcgcggtcgagaccgtcctgccggaagcccccgagctcgca
ggcccctcggcggtcagcatgggcaatccccatgcgatcttctgggtgacggatgcggat
tcctacgacctgacggcgatcggcccgaaattcgagcacgacccggtctttccggagcgg
gccaatatctcgctcgcccaggtcgtcgggtcggaccgcattgtcctgcgcgtctgggag
cggggcgccggcctgacccgcgcctgcggctccgcggcctgcgcgaccctcgtggcggct
tcccgcaaaggcttgaccgggcgcaaggccgcggtctcgcttccaggcggcgacctgctg
atcgcatggcgcgagggcgacgatcacgtgctcatgaccgggccgacggagctcgaacac
gaggggaccttcgcgccctccctcttcgccggagccgcctga
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