Microvirga sp. 17 mud 1-3: C4E04_20160
Help
Entry
C4E04_20160 CDS
T05470
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
miv
Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
miv03016
]
C4E04_20160
Enzymes [BR:
miv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C4E04_20160
Transfer RNA biogenesis [BR:
miv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4E04_20160
Prokaryotic type
C4E04_20160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HTH_15
PHY
Motif
Other DBs
NCBI-ProteinID:
AWM88803
UniProt:
A0A2Z3IDG1
LinkDB
All DBs
Position
4291951..4292871
Genome browser
AA seq
306 aa
AA seq
DB search
MTEERPQRRPQGERPKKRDVNGWIILDKGVGMTSTHAVAVVKRNLLAKKAGHAGTLDPLA
SGILPIALGEATKTVPFVMDGRKSYVFTVAWGAETNTDDAEGDIVGRTELLPDPAAIEAL
LPRFTGAIEQVPPRFSAIKIQGERAYDLAREGEVVELQPRTVEIDRLSLVHHEGNRSVIE
ADCGKGTYVRAIARDLGRALGCLGHIAALRRTRVGPFTEGDAVTVDDLATDPAALRPVEA
ALSEIPAVPVSRDMAGRLMRGQSIILRGREAPVSGKVYATCSGVLVAVGDVERGELVPHR
VFNLGA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgaccgcagcggcgcccgcagggagagcgcccgaagaagcgcgacgtg
aatggatggatcatcctcgacaagggcgtcggcatgacctcgacccatgcggtcgcggtg
gtcaagcgcaaccttctggccaagaaggccggccacgccggcaccctcgatccgctcgcc
tccggcatcctgcccatcgctctgggcgaggcgaccaagaccgttccgttcgtcatggac
gggcgcaagtcctatgtcttcacggttgcctggggcgccgagaccaatacggacgatgcc
gagggcgacatcgtcgggcgcaccgagcttctaccggatccggccgccatcgaggccctt
ctgccccgtttcacgggcgcgatcgaacaggtgccgccgcgcttttcggccatcaagatc
caaggcgagcgcgcctatgacctcgcccgtgaaggcgaggtggtggagctgcagccccgc
acggtagagatcgaccgtctcagcctggtccatcacgagggcaaccgctcggtgatcgag
gccgattgcggcaaggggacctatgtgcgggccattgcccgcgacctcggccgggcgctt
ggctgcctcggccatatcgcggcgctccggcgcacccgggtcggccccttcacggagggc
gacgcggtcacggtggacgatctcgccaccgacccggccgccctgcggcccgtggaggcg
gccttgagcgaaatccccgccgttccggtgagccgggacatggcagggcgcctcatgcgc
ggccagtcgattatccttcgcggccgggaagctccggtctccggcaaggtctatgccact
tgcagtggcgtcctcgtggccgtgggcgacgtggagcgcggcgagctggtgccgcaccgg
gtgttcaacctgggagcttaa
DBGET
integrated database retrieval system
