Malacoplasma iowae: EER00_01230
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Entry
EER00_01230 CDS
T06673
Name
(GenBank) Rnase Y domain-containing protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
miw
Malacoplasma iowae
Pathway
miw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
miw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EER00_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
miw03019
]
EER00_01230
Messenger RNA biogenesis [BR:
miw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EER00_01230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_PNO1_2nd
KH_1
HDOD
DUF4446
KH_KhpA-B
YxzE
FUT8_N_cat
DUF6272
Tetraspanin
DUF948
Motif
Other DBs
NCBI-ProteinID:
QHG89521
UniProt:
A0A6P1LGJ1
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All DBs
Position
complement(770682..772166)
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AA seq
494 aa
AA seq
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MVLNIVFFVIIICTLLFFGIFAIVIFTKRKSRNNKRDLSTKISGKNISSNNENNIQNIYE
KKNELDNLVKTNKNLKQQLELSLSKYNALNFSLKNKSENLDKQLQEISGLSKEEASKIIL
NNLKQELNVERSKMISNFETEKKVELENKARQILVDTMERMAEDIAISKTTYTIKLEEDN
IKGRIIGKDGRNKKCFENTTGVELIIEKDPEVTISCLNPIRREIAKNLLEKLILNKNIEP
SRIEKYYDIELENMNNRLYEIGKEALENKLQIFDVNKELYPYVGRLYFRTSFSQNNLTHA
IECAMLASNIAIELNVDKYKAKKAAFFHDIGKSTDFEMDNDHVESGLVLARKYNLEDYII
NAIESHHEKVPCDNIYSCITKIVDKISASRPGARHISHEEYLQKINTIEEICNSFDGVKN
SYAIKAGKQVRVIIDPKTINDDALTTLAYDIKQKLETDDITNKQPIEIILIRENRLEVKS
KGSASRSIEPNTNE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtattaaatatagttttttttgtcattattatttgtacacttttattttttggtatt
tttgcaattgttatttttacaaaaagaaaatcaagaaataataaaagggatttatcaact
aaaataagtggtaaaaatatttcaagtaataatgaaaacaatatacaaaatatatatgaa
aagaaaaatgaattagataacttagtaaaaactaataaaaatttaaaacaacaattagaa
ttatcattatctaaatataatgcattaaatttttctttaaaaaataaaagtgaaaatctt
gataaacaattacaagaaataagtggtttatcaaaagaagaggcatcaaaaataattctt
aataatttaaaacaagaattgaatgttgaaagaagcaaaatgataagtaattttgaaaca
gaaaaaaaagtagaattagaaaataaagctagacaaatattagttgatacaatggaaaga
atggctgaagatatagctattagtaaaactacatatacaattaaacttgaagaagataac
attaaaggaagaataattggaaaagatggtagaaataaaaaatgttttgaaaatacaact
ggtgttgaacttatcattgaaaaagatccagaagttactatttcttgtttaaatccaatt
agaagagaaatagctaaaaacctattagaaaaattaattttaaacaaaaatattgaacca
agtagaattgaaaaatattatgatattgaacttgaaaatatgaataatagattgtatgaa
ataggaaaagaggctttagaaaacaaattacaaatatttgatgtaaataaagaactttat
ccatatgttggtagattatattttagaacatcattttcgcaaaataatttaacacatgca
attgaatgtgctatgctagcttcaaacatagctattgaattaaatgttgataaatataaa
gcaaaaaaagcagctttttttcatgatattggaaaatcaacagattttgaaatggataat
gatcatgttgaaagcggtttagttttagctagaaaatataatttagaagattatattatt
aatgcaatagaatctcaccatgaaaaagttccatgtgacaatatttattcatgtataact
aaaatagttgataaaatttcagcttcaagaccaggagctagacatatatcacatgaagaa
tatttacaaaaaattaatacaattgaagaaatttgtaattcatttgatggagtaaaaaat
tcatatgcgattaaagctggaaaacaagtcagagtaattattgaccctaaaacaataaat
gatgatgcattaacaacattagcatatgatattaaacaaaaacttgaaactgatgatatt
acaaataaacaacctattgaaattattttaataagagaaaatagattagaagtaaaatca
aaaggaagtgcttctagaagtattgaaccaaatacaaatgaatag
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